RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FBP1P09467 338 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 FCER1GP30273 86 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 GNG4P50150 75 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 CEBPEQ15744 281 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 MS4A18Q3C1V0 323 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 TLNRD1Q9H1K6 362 aa11.97□□□□□ -0.49
VCP-201ENST00000358901 A0A0B4J293 547 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 ZNHIT1O43257 154 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 ISG15P05161 165 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 SULT1A2P50226 295 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 APOBEC4Q8WW27 367 aaKnown RBP11.96□□□□□ -0.49
VCP-201ENST00000358901 DOK5Q9P104 306 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 ACACAQ13085 2346 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 C11orf94C9JXX5 98 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 DNPH1O43598 174 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 RBM11P57052 281 aaKnown RBP11.96□□□□□ -0.49
VCP-201ENST00000358901 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 SSMEM1Q8WWF3 244 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 ADIPOR1Q96A54 375 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 R3HDM4Q96D70 268 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 Q9N2K0 584 aa11.96□□□□□ -0.49
VCP-201ENST00000358901 LOC102723971A0A1B0GUV8 181 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 RPL36A-HNRNPH2H7BZ11 118 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 SMIM6P0DI80 62 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 PSG2P11465 335 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 EGR4Q05215 589 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 LRRC10Q5BKY1 277 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 IGSF11Q5DX21 431 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 FAM162BQ5T6X4 162 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 CCL17Q92583 94 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 TMEM74BQ9NUR3 256 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 LHFPL6Q9Y693 200 aa11.96□□□□□ -0.5
VCP-201ENST00000358901 GPR179Q6PRD1 2367 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR2A4O95047 310 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 FGF2P09038 288 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 SOX8P57073 446 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 PSG4Q00888 419 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 C1orf210Q8IVY1 113 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR10C1Q96KK4 312 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR2A7Q96R45 310 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 KLK10O43240 276 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 HAND1O96004 215 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 PGA4P0DJD7 388 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 RAB7AP51149 207 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 TBX6O95947 436 aaPredicted RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 PAX6P26367 422 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 KLF3P57682 345 aaPredicted RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 MRPS11P82912 194 aaKnown RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 OR5I1Q13606 314 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 TRAT1Q6PIZ9 186 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 OR6C3Q9NZP0 311 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 TIMM9Q9Y5J7 89 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 TRAV34A0A0B4J273 112 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 A0A0G2JK05 382 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 PAGE4O60829 102 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 F2RP25116 425 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 ADAMTS17Q8TE56 1095 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 AQP3Q92482 292 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 GPR87Q9BY21 358 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 AICDAQ9GZX7 198 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 WDR54Q9H977 334 aa11.95□□□□□ -0.5
VCP-201ENST00000358901 AURKAIP1Q9NWT8 199 aaPredicted RBP11.95□□□□□ -0.5
VCP-201ENST00000358901 A0A1B0GU03 582 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 IFI6P09912 130 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 AMTP48728 403 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 HNRNPA3P51991 378 aaKnown RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 TNFAIP6P98066 277 aaPredicted RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 DHRS7BQ6IAN0 325 aaPredicted RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 OR4S2Q8NH73 311 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 HSD17B10Q99714 261 aaKnown RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 NDFIP1Q9BT67 221 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 SH2D2AQ9NP31 389 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 G6PCP35575 357 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 CAMPP49913 170 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 TEX30Q5JUR7 227 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 ZNF519Q8TB69 540 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 CLEC1BQ9P126 229 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 MMP7P09237 267 aaPredicted RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 TCL1AP56279 114 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 SPEM2Q0P670 501 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 HES3Q5TGS1 186 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 FNDC7Q5VTL7 733 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 MAFAQ8NHW3 353 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms