RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PTPMT1Q8WUK0 201 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF707Q96C28 371 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 KLK13Q9UKR3 277 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 DENND4AQ7Z401 1863 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR5B21A6NL26 309 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 SMPD2O60906 423 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 PPYP01298 95 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 PRSS1P07477 247 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 CAPZBP47756 277 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OPN3Q9H1Y3 402 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TMEM38BQ9NVV0 291 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 TRGV10A0A0A0MS01 117 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR5R1Q8NH85 324 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 THAP10Q9P2Z0 257 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 CCL27Q9Y4X3 112 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 ALKBH3Q96Q83 286 aaPredicted RBP7.75□□□□□ -1.17
COL6A6-201ENST00000358511 FGF22Q9HCT0 170 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 ST6GALNAC2Q9UJ37 374 aa7.75□□□□□ -1.17
COL6A6-201ENST00000358511 OR2A4O95047 310 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 HERVK_113P61574 105 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 GNG3P63215 75 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 GGTLC2Q14390 218 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CYB5R2Q6BCY4 276 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CD200R1LQ6Q8B3 271 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 OR2A7Q96R45 310 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SLC26A1Q9H2B4 701 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 A0A096LPE4 126 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 A0A1W2PPZ6 126 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CD8AP01732 235 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SOD3P08294 240 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 MMP9P14780 707 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 GZMMP51124 257 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 WDFY1Q8IWB7 410 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 MUC15Q8N387 334 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 TXNDC17Q9BRA2 123 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 MRPL13Q9BYD1 178 aaKnown RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ALPK3Q96L96 1907 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 A0A0B4J293 547 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CSN3P07498 182 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 DANCRP0C864 163 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ACER2Q5QJU3 275 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 C10orf111Q8N326 155 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 AHDC1Q5TGY3 1603 aaPredicted RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 TRBV9A0A0B4J1U6 114 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 LSM11P83369 360 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 Q6ZNB5 142 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 WNT2BQ93097 391 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 OR51B4Q9Y5P0 310 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 DSPPQ9NZW4 1301 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 RNF224P0DH78 156 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF117Q03924 483 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 LYZL2Q7Z4W2 148 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ASB5Q8WWX0 329 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SEBOXQ9HB31 216 aaPredicted RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 HCSTQ9UBK5 93 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PEF1Q9UBV8 284 aaKnown RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 TCFL5Q9UL49 500 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 AUP1Q9Y679 476 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CACNA1BQ00975 2339 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 KLRC4-KLRK1H3BQV0 150 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 KLF7O75840 302 aaPredicted RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF141Q15928 474 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 CARFQ8N187 725 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 ABHD14BQ96IU4 210 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 OR5AC2Q9NZP5 309 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PKDREJQ9NTG1 2253 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 GCSHP23434 173 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 TMEM50BP56557 158 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SLC25A34Q6PIV7 304 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 GPR27Q9NS67 375 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 NKX2-6A6NCS4 301 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PAGE4O60829 102 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 SSX8Q7RTT4 187 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 MRPL24Q96A35 216 aaKnown RBP7.74□□□□□ -1.17
COL6A6-201ENST00000358511 MOGAT1Q96PD6 335 aa7.74□□□□□ -1.17
COL6A6-201ENST00000358511 PLPP3O14495 311 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 RPS4XP62701 263 aaKnown RBP7.73□□□□□ -1.17
COL6A6-201ENST00000358511 AESQ08117 197 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 FZD5Q13467 585 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 PRICKLE4Q2TBC4 344 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 OR8B12Q8NGG6 310 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 SPPL3Q8TCT6 385 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 ZCCHC14Q8WYQ9 949 aaKnown RBP7.73□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF831Q5JPB2 1677 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 CRYAAP02489 173 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 BTF3P20290 206 aaKnown RBP7.73□□□□□ -1.17
COL6A6-201ENST00000358511 HIKESHIQ53FT3 197 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 Q5PR19 223 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 DOLPP1Q86YN1 238 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 OR2V1Q8NHB1 315 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 MRPS2Q9Y399 296 aaKnown RBP7.73□□□□□ -1.17
COL6A6-201ENST00000358511 TANC1Q9C0D5 1861 aa7.73□□□□□ -1.17
COL6A6-201ENST00000358511 NMUP48645 174 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms