RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 ZNF441Q8N8Z8 693 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 SOX8P57073 446 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 ERVFRD-1P60508 538 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 SPEM2Q0P670 501 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 DEFB124Q8NES8 71 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 ALG14Q96F25 216 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 FRRS1LQ9P0K9 344 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 IL36RNQ9UBH0 155 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 CACNA1SQ13698 1873 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 SCN11AQ9UI33 1791 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 PGA4P0DJD7 388 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 PGA5P0DJD9 388 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 TMEM50BP56557 158 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 UBE2V2Q15819 145 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 PGLYRP4Q96LB8 373 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 TRAV8-7A0A075B6U6 113 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 MARVELD1Q9BSK0 173 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 TMEM196Q5HYL7 178 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF770Q6IQ21 691 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 OR51B2Q9Y5P1 312 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TIAM2Q8IVF5 1701 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 LMX1BO60663 402 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 IGHV4-34P06331 123 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 OR4D9Q8NGE8 314 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TRAV38-1A0A0B4J264 116 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 PLAUP00749 431 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 CT62P0C5K7 136 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 WNT2BQ93097 391 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 MRM2Q9UI43 246 aaKnown RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 CDC42EP2O14613 210 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 CTSDP07339 412 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 CELA2BP08218 269 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 C9orf62Q8N4C0 152 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 OIT3Q8WWZ8 545 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF707Q96C28 371 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 VSTM2LQ96N03 204 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 WDFY2Q96P53 400 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 NEU1Q99519 415 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 PCGF1Q9BSM1 259 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TCFL5Q9UL49 500 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 SOD3P08294 240 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 MGAT2Q10469 447 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 FAM53AQ6NSI3 398 aaPredicted RBP9.83□□□□□ -0.84
COL11A1-202ENST00000358392 PAXXQ9BUH6 204 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 KBTBD11O94819 623 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 PRSS2P07478 247 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 MFAP2P55001 183 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 LOXL3P58215 753 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 SAP30LQ9HAJ7 183 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TINAGQ9UJW2 476 aa9.83□□□□□ -0.84
COL11A1-202ENST00000358392 TRBV23-1A0A0A0MS06 115 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TMEM189A5PLL7 270 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 PPP1R17O96001 155 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TAF1P21675 1872 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 NRTNQ99748 197 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 ZNFX1Q9P2E3 1918 aaKnown RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 C7orf71A4D174 169 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 FXYD1O00168 92 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 FAM3BP58499 235 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 CES1P1Q9UKY3 287 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 HIGD1AQ9Y241 93 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 FAM181BA6NEQ2 426 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 CRHP06850 196 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 COX6CP09669 75 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 SRFP11831 508 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 KIR3DL2P43630 455 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 GPR3P46089 330 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 HIKESHIQ53FT3 197 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 ACER2Q5QJU3 275 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 MRPL30Q8TCC3 161 aaKnown RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 BRS3P32247 399 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 WDR25Q64LD2 544 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TMEM38BQ9NVV0 291 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF638Q14966 1978 aaKnown RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 A6NJY4 79 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 CTSVO60911 334 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 FGF9P31371 208 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TEPPQ6URK8 271 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TDHQ8IZJ6 230 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 ZNF418Q8TF45 676 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 C16orf92Q96LL3 132 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 PPYP01298 95 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 MAS1LP35410 378 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 SKP2Q13309 424 aa9.82□□□□□ -0.84
COL11A1-202ENST00000358392 TP53I13Q8NBR0 393 aaPredicted RBP9.82□□□□□ -0.84
COL11A1-202ENST00000358392 KIF13AQ9H1H9 1805 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms