RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SCG5P05408 212 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 CTSSP25774 331 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SIRT7Q9NRC8 400 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 TMEM56-RWDD3S4R434 201 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 LDLRAD4O15165 306 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 ZFP36L2P47974 494 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 AQP6Q13520 282 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 Q6ZNX1 250 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 RTL10Q7L3V2 364 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 DND1Q8IYX4 353 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
CHD3-202ENST00000358181 SEPSECSQ9HD40 501 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 MRPS18BQ9Y676 258 aaKnown RBP8.62□□□□□ -1.03
CHD3-202ENST00000358181 TNFSF14O43557 240 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
CHD3-202ENST00000358181 ZNF32P17041 273 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 RIPPLY3P57055 190 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 TMEM52BQ4KMG9 183 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 NHLRC1Q6VVB1 395 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 ANKRD37Q7Z713 158 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 FAM26EQ8N5C1 309 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 OR1K1Q8NGR3 316 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 CACFD1Q9UGQ2 172 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 TINAGQ9UJW2 476 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 A0A0A6YYJ9 748 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 SRSF7Q16629 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHD3-202ENST00000358181 ARIH2OSQ8N7S6 290 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 H0YIG0 161 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 CYS1Q717R9 158 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 OR51B2Q9Y5P1 312 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 SPEM1Q8N4L4 309 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 TEAD3Q99594 435 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 HDHD3Q9BSH5 251 aaPredicted RBP8.61□□□□□ -1.03
CHD3-202ENST00000358181 MAP1LC3B2A6NCE7 125 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 YBX1P67809 324 aaKnown RBP8.61□□□□□ -1.03
CHD3-202ENST00000358181 FMODQ06828 376 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 GATA6Q92908 595 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 SIGLEC11Q96RL6 698 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 PRSS27Q9BQR3 290 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 MAP1LC3BQ9GZQ8 125 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 CTLA4P16410 223 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
CHD3-202ENST00000358181 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 DCAF12L2Q5VW00 463 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 OR9G4Q8NGQ1 327 aa8.61□□□□□ -1.03
CHD3-202ENST00000358181 PITX3O75364 302 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 GZMBP10144 247 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 CTGFP29279 349 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 SLC6A1P30531 599 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 DPPA3Q6W0C5 159 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 Q6ZSR9 355 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 WDFY1Q8IWB7 410 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ST8SIA1Q92185 356 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 MS4A6EQ96DS6 147 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 POMT2Q9UKY4 750 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 RER1O15258 196 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 GPX5O75715 221 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 COL10A1Q03692 680 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 C1orf185Q5T7R7 199 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 TMEM38AQ9H6F2 299 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 S4R3C0 116 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 FUT3P21217 361 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 PDLIM4P50479 330 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 PHYHIPQ92561 330 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 SDF2Q99470 211 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 DAPP1Q9UN19 280 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 NPBWR2P48146 333 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 CCL13Q99616 98 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 AUNIPQ9H7T9 357 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 NTMQ9P121 344 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ZFP30Q9Y2G7 519 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 PPM1DO15297 605 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ADRB1P08588 477 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 IER3P46695 156 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 LCN2P80188 198 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 PCOLCEQ15113 449 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 FCRL6Q6DN72 434 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ARHGAP5-AS1Q96IT6 56 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 DOK1Q99704 481 aa8.6□□□□□ -1.03
CHD3-202ENST00000358181 ISG20L2Q9H9L3 353 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 CISD1Q9NZ45 108 aaKnown RBP8.6□□□□□ -1.03
CHD3-202ENST00000358181 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 CDIPTO14735 213 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ZNF253O75346 499 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 SPNP16150 400 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 MDH2P40926 338 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms