RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 CLDN1O95832 211 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 ERVFC1-1P60608 527 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 TGFBR3Q03167 851 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 C1QL4Q86Z23 238 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 LHFPL6Q9Y693 200 aa8.69□□□□□ -1.02
RNF40-202ENST00000357890 MDFIC2A0A1B0GVS7 189 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 CHST1O43916 411 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ZNF737O75373 536 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 PNLIPP16233 465 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 OTX2P32243 289 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 UCP3P55916 312 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ACOT6Q3I5F7 207 aaPredicted RBP8.68□□□□□ -1.02
RNF40-202ENST00000357890 CXorf66Q5JRM2 361 aaPredicted RBP8.68□□□□□ -1.02
RNF40-202ENST00000357890 SLC35E3Q7Z769 313 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 TECTBQ96PL2 329 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 TMEM14DPA8MWL7 114 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 HPRT1P00492 218 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 CTSDP07339 412 aaPredicted RBP8.68□□□□□ -1.02
RNF40-202ENST00000357890 COL5A1-AS1Q5SY13 56 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 SIGLECL1Q8N7X8 197 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 OR5R1Q8NH85 324 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 CYYR1Q96J86 154 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 TMEM9BQ9NQ34 198 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 SERTAD4Q9NUC0 356 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 SPINK2P20155 84 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 CFPP27918 469 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 CCKARP32238 428 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ECI1P42126 302 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 TMEM50BP56557 158 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 BAXQ07812 192 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
RNF40-202ENST00000357890 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
RNF40-202ENST00000357890 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ST6GALNAC3Q8NDV1 305 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ZNF596Q8TC21 504 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 GINS3Q9BRX5 216 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ARV1Q9H2C2 271 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 SEMA5BQ9P283 1151 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 ANXA10Q9UJ72 324 aa8.68□□□□□ -1.02
RNF40-202ENST00000357890 LAMA1P25391 3075 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 UBE2L5PA0A1B0GUS4 154 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 BTF3P20290 206 aaKnown RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 CHRNB4P30926 498 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 RAB7AP51149 207 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 EFNA3P52797 238 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 TPPP2P59282 170 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 ZNF90Q03938 601 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 C1QL2Q7Z5L3 287 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 C17orf82Q86X59 251 aaPredicted RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 DUSP23Q9BVJ7 150 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 CACNA1GO43497 2377 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 B4DEV8 164 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 HSPB1P04792 205 aaKnown RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 CFIP05156 583 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 CEACAM1P13688 526 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 CSRP1P21291 193 aaKnown RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 PMELP40967 661 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 CNN1P51911 297 aaKnown RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 C9orf135Q5VTT2 229 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 WDR74Q6RFH5 385 aaPredicted RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 TMEM252Q8N6L7 170 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 UBALD1Q8TB05 177 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 NAT6Q93015 286 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 NPIPB13A6NJU9 1138 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 NPIPB4C9JG80 1138 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 H0Y8G0 127 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 IFNL4K9M1U5 179 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 NUBP1P53384 320 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 PPP1CBP62140 327 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 PLCXD3Q63HM9 321 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 ZNF439Q8NDP4 499 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 C22orf15Q8WYQ4 148 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 ZNF552Q9H707 407 aaPredicted RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 Q9N2K0 584 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 ZNF586Q9NXT0 402 aa8.67□□□□□ -1.02
RNF40-202ENST00000357890 PTRH2Q9Y3E5 179 aaKnown RBP8.67□□□□□ -1.02
RNF40-202ENST00000357890 DHRS3O75911 302 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 IGHV3-9P01782 118 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 BCL2P10415 239 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 IRF2P14316 349 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 KITLGP21583 273 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 FKBP2P26885 142 aaKnown RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 CXCL12P48061 93 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 ZNF133P52736 654 aaPredicted RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 SRSF4Q08170 494 aaKnown RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
RNF40-202ENST00000357890 ZNF441Q8N8Z8 693 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 MRGPRFQ96AM1 343 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PRO3102Q9H379 93 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PRUNE2Q8WUY3 3088 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 PATE4P0C8F1 98 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 HBG1P69891 147 aa8.66□□□□□ -1.02
RNF40-202ENST00000357890 HBG2P69892 147 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms