RNA–Protein interactions for RNA: ENST00000357857.14

CLN3-204, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-204ENST00000357857 SELLP14151 372 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 PGAM2P15259 253 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 IL13RA1P78552 427 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 SURF2Q15527 256 aaPredicted RBP15.57■□□□□ 0.08
CLN3-204ENST00000357857 C6orf183Q5T699 404 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 DUX4L9Q6RFH8 374 aaPredicted RBP15.57■□□□□ 0.08
CLN3-204ENST00000357857 PEG10Q86TG7 708 aaKnown RBP15.57■□□□□ 0.08
CLN3-204ENST00000357857 FAM216BQ8N7L0 139 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 KIRREL1Q96J84 757 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 TAF9BQ9HBM6 251 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 DLL4Q9NR61 685 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 DUX4Q9UBX2 424 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 PCDHB10Q9UN67 800 aa15.57■□□□□ 0.08
CLN3-204ENST00000357857 UBR5O95071 2799 aaPredicted RBP15.56■□□□□ 0.08
CLN3-204ENST00000357857 LYNX1G3V0Z9 82 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 LYNX1P0DP58 116 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 NFYAP23511 347 aaPredicted RBP15.56■□□□□ 0.08
CLN3-204ENST00000357857 RRAS2P62070 204 aaPredicted RBP15.56■□□□□ 0.08
CLN3-204ENST00000357857 TLE4Q04727 773 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 SLC25A42Q86VD7 318 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 CAPSLQ8WWF8 208 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 FXYD6Q9H0Q3 95 aa15.56■□□□□ 0.08
CLN3-204ENST00000357857 ODAMA1E959 279 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 SNRPGP15A8MWD9 76 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 TMPRSS2O15393 492 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 OR4E1P0C645 316 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 AADACP22760 399 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 P2RX3P56373 397 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 HERV-K104P61576 105 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 BAMBIQ13145 260 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 KCNJ8Q15842 424 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 C4orf46Q504U0 113 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 AKAP14Q86UN6 197 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 PRR18Q8N4B5 295 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 MRGPRDQ8TDS7 321 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 IL1F10Q8WWZ1 152 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 MOB3AQ96BX8 217 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 MED28Q9H204 178 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 C5orf66Q9H5L9 145 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 ZNF221Q9UK13 617 aa15.55■□□□□ 0.08
CLN3-204ENST00000357857 TRBV6-7A0A0A0MS04 114 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 C12orf77C9JDV5 145 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 TNFRSF13BO14836 293 aaPredicted RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 CREBL2O60519 120 aaPredicted RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 RP2O75695 350 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 DIRAS3O95661 229 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 PPYP01298 95 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ERP29P30040 261 aaKnown RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 EDDM3BP56851 147 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 TAS2R31P59538 309 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 FXYD4P59646 89 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 MRPS11P82912 194 aaKnown RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 ZNF626Q68DY1 528 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 TRAT1Q6PIZ9 186 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ADAD2Q8NCV1 583 aaKnown RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 OR52B4Q8NGK2 314 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 OR13A1Q8NGR1 328 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 OR10J5Q8NHC4 309 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 LURAP1Q96LR2 239 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 NCOR1P1Q9H4R4 102 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ZNF69Q9UC07 566 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 FAM172BPA6NC97 362 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 NPIPB11E5RHQ5 1161 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 SSNA1O43805 119 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ZNF728P0DKX0 622 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ZNF554Q86TJ5 538 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 UBALD1Q8TB05 177 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 ZFAND1Q8TCF1 268 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 TOMM40LQ969M1 308 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 TMEM246Q9BRR3 403 aa15.54■□□□□ 0.08
CLN3-204ENST00000357857 RTBDNQ9BSG5 229 aaPredicted RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 C14orf166Q9Y224 244 aaKnown RBP15.54■□□□□ 0.08
CLN3-204ENST00000357857 SPTAN1Q13813 2472 aaKnown RBP15.53■□□□□ 0.08
CLN3-204ENST00000357857 ADAM20O43506 726 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 NDUFA2O43678 99 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 TUSC2O75896 110 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 FSTL3O95633 263 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 CLDN1O95832 211 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 DAOP14920 347 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 AKR1C4P17516 323 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 PI3P19957 117 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 CDKN1AP38936 164 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 UCP3P55916 312 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 CD276Q5ZPR3 534 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 FAHD2BQ6P2I3 314 aaPredicted RBP15.53■□□□□ 0.08
CLN3-204ENST00000357857 OR1L1Q8NH94 360 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 PPP1R14BQ96C90 147 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 FAHD2AQ96GK7 314 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 DCTN5Q9BTE1 182 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 CLEC4MQ9H2X3 399 aaPredicted RBP15.53■□□□□ 0.08
CLN3-204ENST00000357857 SLC23A1Q9UHI7 598 aa15.53■□□□□ 0.08
CLN3-204ENST00000357857 CCNKO75909 580 aa15.52■□□□□ 0.08
CLN3-204ENST00000357857 LY6HO94772 140 aa15.52■□□□□ 0.08
CLN3-204ENST00000357857 HBZP02008 142 aa15.52■□□□□ 0.08
CLN3-204ENST00000357857 CTSDP07339 412 aaPredicted RBP15.52■□□□□ 0.08
CLN3-204ENST00000357857 IL2RGP31785 369 aa15.52■□□□□ 0.08
CLN3-204ENST00000357857 UBE2MP61081 183 aaKnown RBP15.52■□□□□ 0.08
CLN3-204ENST00000357857 LYPD2Q6UXB3 125 aa15.52■□□□□ 0.08
CLN3-204ENST00000357857 H1FOOQ8IZA3 346 aaPredicted RBP15.52■□□□□ 0.08
CLN3-204ENST00000357857 ZNF431Q8TF32 576 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms