RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 HELTA6NFD8 242 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 RUNX1Q01196 453 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 PMS2P11Q13670 270 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 KLHDC8BQ8IXV7 354 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 C1orf174Q8IYL3 243 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 PNKDQ8N490 385 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-202ENST00000357409 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 TAF1P21675 1872 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 TRAV8-7A0A075B6U6 113 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 ISG15P05161 165 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 GLIPR1P48060 266 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 TPBGQ13641 420 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 WDR74Q6RFH5 385 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-202ENST00000357409 RAB37Q96AX2 223 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 NOL4LQ96MY1 436 aaPredicted RBP6.39□□□□□ -1.39
VPS13A-202ENST00000357409 HEXA-AS1Q9H8Q6 139 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 MRM2Q9UI43 246 aaKnown RBP6.39□□□□□ -1.39
VPS13A-202ENST00000357409 SCARB1Q8WTV0 552 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 DDB2Q92466 427 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 ABHD1Q96SE0 405 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 RAMP1O60894 148 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 KLK2P20151 261 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 TM4SF20Q53R12 229 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 PLSCR2Q9NRY7 297 aa6.39□□□□□ -1.39
VPS13A-202ENST00000357409 KNDC1Q76NI1 1749 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 M0R2Z0 102 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 GNLYP22749 145 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SNAI2O43623 268 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 FGF5P12034 268 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 FKBP2P26885 142 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 DDOSTP39656 456 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 FOXB2Q5VYV0 432 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 APCDD1LQ8NCL9 501 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 CES1P1Q9UKY3 287 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 PPP1R2P9O14990 202 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF253O75346 499 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 BAP18Q8IXM2 172 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 MED30Q96HR3 178 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 BEX4Q9NWD9 120 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 WIPI2Q9Y4P8 454 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ZFAND2BQ8WV99 257 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 C10orf90Q96M02 699 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SLC45A2Q9UMX9 530 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 CHD2O14647 1828 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 IGF2P01344 180 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 GCSAMLQ5JQS6 135 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 OR2W3Q7Z3T1 314 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 GPX7Q96SL4 187 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 RCC2Q9P258 522 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 IL36RNQ9UBH0 155 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SLC25A17O43808 307 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF561Q8N587 486 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 GRAMD2BQ96HH9 432 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 FAM210BQ96KR6 192 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SRXN1Q9BYN0 137 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SLC25A19Q9HC21 320 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 AKIP1Q9NQ31 210 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SLC52A3Q9NQ40 469 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF275Q9NSD4 429 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 hCG_38984A0A1B0GV85 526 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 HSPB2A8KAH6 182 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 CD82P27701 267 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 HNRNPA3P51991 378 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 CACNG7P62955 275 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 HSPB2Q16082 182 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 RIMKLAQ8IXN7 391 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 PILRBQ9UKJ0 227 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 MYO9BQ13459 2157 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ZG16O60844 167 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SRPXP78539 464 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 GABRA6Q16445 453 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 Q6ZN92 141 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 ST6GALNAC3Q8NDV1 305 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 C7orf69Q9H7B7 122 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.38□□□□□ -1.39
VPS13A-202ENST00000357409 SPEF2Q9C093 1822 aa6.38□□□□□ -1.39
VPS13A-202ENST00000357409 PRSS2P07478 247 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 CD300CQ08708 224 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS13A-202ENST00000357409 TRBV5-4A0A0C4DH59 114 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 OOEPA6NGQ2 149 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 MOGAT2Q3SYC2 334 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 FBXL15Q9H469 300 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 A0A0B4J2E0 115 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 A0A1B0GX12 115 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 CTAG2O75638 210 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 JUNBP17275 347 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-202ENST00000357409 DLX1P56177 255 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 PRSS53Q2L4Q9 553 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM229BQ8NBD8 167 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 OR1L6Q8NGR2 347 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 LILRB4Q8NHJ6 448 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 PRRX2Q99811 253 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 A0A0U1RQV5 110 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 MFAP2P55001 183 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 FBXW9Q5XUX1 488 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 LIAT1Q6ZQX7 453 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 SLC26A10Q8NG04 563 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms