RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 COLCA2A8K830 154 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SYNGR2O43760 224 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TIMM8AO60220 97 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 ZIC3O60481 467 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TRGC2P03986 189 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 MMP9P14780 707 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 CCL1P22362 96 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TBC1D28Q2M2D7 210 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 VHLLQ6RSH7 139 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 H2BFWTQ7Z2G1 175 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 C17orf82Q86X59 251 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 M1APQ8TC57 530 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TMEM37Q8WXS4 190 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 USP34Q70CQ2 3546 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 EP300Q09472 2414 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 SPTBN2O15020 2390 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 PQLC2LA1A4F0 135 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 DEFB108AA8MXU0 73 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 PITX3O75364 302 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGHV3-13P01766 116 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGHV3-7P01780 117 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 COX6A1P12074 109 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 GCH1P30793 250 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ARR3P36575 388 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 MAGEA5P43359 124 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ERVS71-1P61550 626 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ERVK-16P61578 105 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SLC38A11Q08AI6 406 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IL24Q13007 206 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 OR8G1Q15617 311 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 HIKESHIQ53FT3 197 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 OR10P1Q8NGE3 313 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 OR13D1Q8NGV5 346 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TMEM54Q969K7 222 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 RAB40CQ96S21 281 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ARV1Q9H2C2 271 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 GCM1Q9NP62 436 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 HEYLQ9NQ87 328 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 KIAA1456Q9P272 454 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 DUSP13Q9UII6 198 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TUBD1Q9UJT1 453 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TCFL5Q9UL49 500 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGLV3-12A0A075B6K2 115 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGHV3-43A0A0B4J1X8 118 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGKV1-12A0A0C4DH73 117 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SHISA7A6NL88 538 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 RRP8O43159 456 aaKnown RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 NGFP01138 241 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGKV1D-12P01611 117 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGHV3-43DP0DP04 118 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 FGF7P21781 194 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 PTGDSP41222 190 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 TAS2R30P59541 319 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 CCL20P78556 96 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 OR1C1Q15619 314 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 BATFQ16520 125 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 KCNMB1Q16558 191 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ZNF383Q8NA42 475 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 DNASE2BQ8WZ79 361 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 RIMS4Q9H426 269 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 OPA3Q9H6K4 179 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 WDR54Q9H977 334 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 CACNA1GO43497 2377 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 C2orf16Q68DN1 1984 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 PI4KAP42356 2102 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 IGKV1-27A0A075B6S5 117 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 A0A1W2PPE3 182 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 C3orf80F5H4A9 247 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SH2D1BO14796 132 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SYNGR3O43761 229 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 CD5P06127 495 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SUCLG1P53597 346 aaKnown RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 EDDM3BP56851 147 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 OR8B8Q15620 311 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SLC25A53Q5H9E4 307 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 ZNF66Q6ZN08 573 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 SELENOHQ8IZQ5 122 aaKnown RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 GALNT14Q96FL9 552 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 GINS3Q9BRX5 216 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 LYRM2Q9NU23 88 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 AURKAIP1Q9NWT8 199 aaPredicted RBP5.89□□□□□ -1.47
RTN4-203ENST00000357376 FZR1Q9UM11 496 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 POLDIP2Q9Y2S7 368 aa5.89□□□□□ -1.47
RTN4-203ENST00000357376 PCNX3Q9H6A9 2034 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 CDIPTO14735 213 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 ZNF737O75373 536 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 CLN5O75503 358 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 CD63P08962 238 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 CD46P15529 392 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 F2RP25116 425 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 FABP6P51161 128 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 COL19A1Q14993 1142 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 KCNIP4Q6PIL6 250 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 BTNL3Q6UXE8 466 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 FADS6Q8N9I5 356 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 FGFBP3Q8TAT2 258 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 SAP25Q8TEE9 199 aa5.88□□□□□ -1.47
RTN4-203ENST00000357376 PATZ1Q9HBE1 687 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms