RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MDH2P40926 338 aaKnown RBP15.24■□□□□ 0.03
COL27A1-201ENST00000356083 SPRED3Q2MJR0 410 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 HLA-DRB5Q30154 266 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM196Q5HYL7 178 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TMED3Q9Y3Q3 217 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 C11orf94C9JXX5 98 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 DNLZQ5SXM8 178 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 PTOV1Q86YD1 416 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 CCL19Q99731 98 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 POMT2Q9UKY4 750 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 PTBP1P26599 531 aaKnown RBP eCLIP15.24■□□□□ 0.031e-8■■■□□ 18.8
COL27A1-201ENST00000356083 LINC00303Q3SY05 128 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM78Q5T7P6 136 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 ANKRD37Q7Z713 158 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TINAGQ9UJW2 476 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 SLC6A1P30531 599 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 NXPH1P58417 271 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 REC114Q7Z4M0 266 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 OR4A5Q8NH83 315 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 VSTM2AQ8TAG5 236 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM129A0AVI4 362 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 PAGE4O60829 102 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 APCSP02743 223 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 LAMTOR1Q6IAA8 161 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 GVQW1Q8N7I0 195 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 SRSF10O75494 262 aaKnown RBP15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM229BQ8NBD8 167 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TBL2Q9Y4P3 447 aaKnown RBP15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM238LA0A1B0GVL6 79 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 A6NJY4 79 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 OR2W3Q7Z3T1 314 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 PRSS41Q7RTY9 318 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM191AQ9H0A3 160 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM167BQ9NRX6 74 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 B4E171 279 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 CDX1P47902 265 aaPredicted RBP15.23■□□□□ 0.03
COL27A1-201ENST00000356083 RPL31P62899 125 aaKnown RBP15.23■□□□□ 0.03
COL27A1-201ENST00000356083 EIF3IQ13347 325 aaKnown RBP15.23■□□□□ 0.03
COL27A1-201ENST00000356083 PWWP2BQ6NUJ5 590 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 ZFP64Q9NPA5 681 aa15.23■□□□□ 0.03
COL27A1-201ENST00000356083 TNFSF14O43557 240 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 DPTQ07507 201 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 NTNG2Q96CW9 530 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 HSF4Q9ULV5 492 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ATP5J2P56134 94 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 DHRS4L2Q6PKH6 230 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 OR10G8Q8NGN5 311 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 CA2P00918 260 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 IER3P46695 156 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 COL16A1Q07092 1604 aaPredicted RBP15.22■□□□□ 0.03
COL27A1-201ENST00000356083 HYAL1Q12794 435 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 CADM4Q8NFZ8 388 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ZNF665Q9H7R5 613 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 M0R143 59 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 MBTPS2O43462 519 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 DLX6P56179 175 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 WDR25Q64LD2 544 aaPredicted RBP15.22■□□□□ 0.03
COL27A1-201ENST00000356083 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 BCL2L11O43521 198 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ZNF56Q15929 161 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 HIST1H4GQ99525 98 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 GZMKP49863 264 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ALKAL1Q6UXT8 129 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 MMP26Q9NRE1 261 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ROS1P08922 2347 aa15.22■□□□□ 0.03
COL27A1-201ENST00000356083 ETHE1O95571 254 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 RPP25Q9BUL9 199 aaKnown RBP15.21■□□□□ 0.03
COL27A1-201ENST00000356083 C16orf97H3BN30 126 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 GPR6P46095 362 aaPredicted RBP15.21■□□□□ 0.03
COL27A1-201ENST00000356083 RSPO2Q6UXX9 243 aaPredicted RBP15.21■□□□□ 0.03
COL27A1-201ENST00000356083 CEACAM5P06731 702 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 ZNF25P17030 456 aaPredicted RBP15.21■□□□□ 0.03
COL27A1-201ENST00000356083 MFAP4P55083 255 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 OTOSQ8NHW6 89 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 NEU1Q99519 415 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 GPX5O75715 221 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 FAM106CPP0CH98 169 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 CKS2P33552 79 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 FHL5Q5TD97 284 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 SLC25A40Q8TBP6 338 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 PRR32B1ATL7 298 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 LRRC75BQ2VPJ9 315 aa15.21■□□□□ 0.03
COL27A1-201ENST00000356083 A0A1B0GTH9 108 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 ZBTB42B2RXF5 422 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 CHST1O43916 411 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 NAT2P11245 290 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 TMPRSS3P57727 454 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.02
COL27A1-201ENST00000356083 OR52M1Q8NGK5 317 aa15.21■□□□□ 0.02
COL27A1-201ENST00000356083 A6NDN8 102 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 MRPL58Q14197 206 aaKnown RBP15.2■□□□□ 0.02
COL27A1-201ENST00000356083 DPPA3Q6W0C5 159 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 SLC35B3Q9H1N7 401 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 PITPNC1Q9UKF7 332 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 GPX2P18283 190 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 HCP5Q6MZN7 132 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 MRGPRFQ96AM1 343 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 FOXJ3Q9UPW0 622 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms