RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IRF3Q14653 427 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 PAN3Q58A45 887 aaKnown RBP12.53□□□□□ -0.4
PDGFA-201ENST00000354513 CCDC144NLQ6NUI1 221 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 NANOGP1Q8N7R0 232 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 Q8NFD4 153 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 PXT1Q8NFP0 134 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 OR52N1Q8NH53 320 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 NR1H4Q96RI1 486 aaPredicted RBP12.53□□□□□ -0.4
PDGFA-201ENST00000354513 MND1Q9BWT6 205 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
PDGFA-201ENST00000354513 MEIKINA0A087WXM9 373 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 H3BUI4 141 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 DUS4LO95620 317 aaKnown RBP12.52□□□□□ -0.41
PDGFA-201ENST00000354513 OCM2P0CE71 109 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
PDGFA-201ENST00000354513 MAP2K4P45985 399 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 GNG10P50151 68 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 GBX2P52951 348 aaPredicted RBP12.52□□□□□ -0.41
PDGFA-201ENST00000354513 IL13RA2Q14627 380 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 FAM53AQ6NSI3 398 aaPredicted RBP12.52□□□□□ -0.41
PDGFA-201ENST00000354513 C8orf86Q6ZUL3 223 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 MRGPRDQ8TDS7 321 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 RPEQ96AT9 228 aa12.52□□□□□ -0.41
PDGFA-201ENST00000354513 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 LINC01548A6NM66 108 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 FAM106CPP0CH98 169 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 WNT4P56705 351 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 MRPL28Q13084 256 aaKnown RBP12.51□□□□□ -0.41
PDGFA-201ENST00000354513 LTC4SQ16873 150 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 ZNF773Q6PK81 442 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 ASCL4Q6XD76 172 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 SERPINA12Q8IW75 414 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 SVOPQ8N4V2 548 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 Q8N6K4 173 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 RFESDQ8TAC1 157 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 P2RX4Q99571 388 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 PCDHB16Q9NRJ7 776 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 BABAM2Q9NXR7 383 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 TAS2R4Q9NYW5 299 aa12.51□□□□□ -0.41
PDGFA-201ENST00000354513 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
PDGFA-201ENST00000354513 HUWE1Q7Z6Z7 4374 aaKnown RBP12.5□□□□□ -0.41
PDGFA-201ENST00000354513 TMEM212A6NML5 194 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 FGF16O43320 207 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 IGKV1D-33P01593 117 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 IGKV1-33P01594 117 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 IGHG2P01859 326 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 TMEM11P17152 192 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 GTF2A1P52655 376 aaPredicted RBP12.5□□□□□ -0.41
PDGFA-201ENST00000354513 EBI3Q14213 229 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 MED22Q15528 200 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 TBCEQ15813 527 aaPredicted RBP12.5□□□□□ -0.41
PDGFA-201ENST00000354513 SPARTQ8N0X7 666 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 OR5D14Q8NGL3 314 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 OR5AK2Q8NH90 309 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 HAVCR2Q8TDQ0 301 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 TNFAIP8L1Q8WVP5 186 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
PDGFA-201ENST00000354513 DHDHQ9UQ10 334 aa12.5□□□□□ -0.41
PDGFA-201ENST00000354513 LSM2Q9Y333 95 aaKnown RBP12.5□□□□□ -0.41
PDGFA-201ENST00000354513 RAB7AP51149 207 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
PDGFA-201ENST00000354513 MADCAM1Q13477 382 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 HNF4GQ14541 408 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 SPHARQ15513 63 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 TSPAN14Q8NG11 270 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
PDGFA-201ENST00000354513 DUX3Q96PT4 197 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 ACOT13Q9NPJ3 140 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 DNAH7Q8WXX0 4024 aa12.49□□□□□ -0.41
PDGFA-201ENST00000354513 A0A087WXM4 84 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 SERPINE3A8MV23 424 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 C15orf65H3BRN8 121 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 HSD17B6O14756 317 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 CDRT1O95170 752 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 LALBAP00709 142 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 SOX2P48431 317 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 TAS2R43P59537 309 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 HES1Q14469 280 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 CCDC58Q4VC31 144 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 DEFB121Q5J5C9 76 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 RPL22L1Q6P5R6 122 aaKnown RBP12.48□□□□□ -0.41
PDGFA-201ENST00000354513 STPG2Q8N412 459 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 ZFP41Q8N8Y5 198 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 KLHL30-AS1Q8NEE0 82 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 UBALD1Q8TB05 177 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 ORAI1Q96D31 301 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 CYYR1Q96J86 154 aa12.48□□□□□ -0.41
PDGFA-201ENST00000354513 IFT22Q9H7X7 185 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms