RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 TMEM106AQ96A25 262 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 FGF20Q9NP95 211 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 IGHV3-72A0A0B4J1Y9 119 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 TMEM30CPA0ZSE6 113 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 CCRL2O00421 344 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 GAPDHP04406 335 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 GZMHP20718 246 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 SLC6A1P30531 599 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 REG1BP48304 166 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 SLC35B1P78383 322 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 CCDC58Q4VC31 144 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 DDI2Q5TDH0 399 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 RPL22L1Q6P5R6 122 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 FOXRED2Q8IWF2 684 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 LINC00311Q8N616 119 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 Q8N6K4 173 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 EAF1Q96JC9 268 aaPredicted RBP11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 P2RX4Q99571 388 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 TMEM138Q9NPI0 162 aa11.39□□□□□ -0.59
PRPF40A-201ENST00000354363 CSTBP04080 98 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 SERPINA2P20848 420 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF93P35789 620 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ETV1P50549 477 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 SMN1Q16637 294 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 FAM53AQ6NSI3 398 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 LINC00596Q86U02 117 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 IZUMO1Q8IYV9 350 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 OR52M1Q8NGK5 317 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 UBALD1Q8TB05 177 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ARL11Q969Q4 196 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ORAI1Q96D31 301 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 WBP4O75554 376 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 BDKRB2P30411 391 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 PPP3R1P63098 170 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ATAD3CQ5T2N8 411 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 OR2G6Q5TZ20 316 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 TGIF2LXQ8IUE1 241 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF695Q8IW36 515 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 C8orf31Q8N9H6 132 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 Q8N9W7 124 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 CCDC107Q8WV48 283 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 DUX3Q96PT4 197 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 S100A13Q99584 98 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 ABCG5Q9H222 651 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 GFOD1Q9NXC2 390 aa11.38□□□□□ -0.59
PRPF40A-201ENST00000354363 IGHV3-43A0A0B4J1X8 118 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 A0A1W2PP11 408 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 NCBP2LA6PVI3 153 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 H0YHG0 523 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 AP4M1O00189 453 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 OGG1O15527 345 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 ORC5O43913 435 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 IGHV3-43DP0DP04 118 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 DCKP27707 260 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 GPR12P47775 334 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 CD69Q07108 199 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 TEX38Q6PEX7 206 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 OR13C5Q8NGS8 318 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 OR2T10Q8NGZ9 312 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 B9D2Q9BPU9 175 aa11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 PAK1IP1Q9NWT1 392 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-201ENST00000354363 MT-ND4P03905 459 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 IGFBP3P17936 291 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 CD1BP29016 333 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 PNLIPRP3Q17RR3 467 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 SLC22A6Q4U2R8 563 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 TMPRSS11AQ6ZMR5 421 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF497Q6ZNH5 498 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 C10orf67Q8IYJ2 551 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 RTN4IP1Q8WWV3 396 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 SMIM19Q96E16 107 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF184Q99676 751 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 S100A14Q9HCY8 104 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.36□□□□□ -0.599e-6■□□□□ 9.4
PRPF40A-201ENST00000354363 PLSCR3Q9NRY6 295 aa11.36□□□□□ -0.59
PRPF40A-201ENST00000354363 TRBV5-5A0A0J9YX44 114 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 AIPO00170 330 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 CCL24O00175 119 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 SLC31A2O15432 143 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 ZNF780AO75290 641 aaPredicted RBP11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 LALBAP00709 142 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 RPLP1P05386 114 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 GTF2F2P13984 249 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 IL3RAP26951 378 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 RIPK1Q13546 671 aa11.35□□□□□ -0.59
PRPF40A-201ENST00000354363 Q3ZCU0 254 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms