RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ABHD17CQ6PCB6 329 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MRPL21Q7Z2W9 205 aaKnown RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 LINC00346Q8IVM7 164 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 OR2V2Q96R30 315 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TMEM70Q9BUB7 260 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 EGLN1Q9GZT9 426 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TXNRD2Q9NNW7 524 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 FRRS1LQ9P0K9 344 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MRPS16Q9Y3D3 137 aaKnown RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 AMY1AP04745 511 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 BCL3P20749 454 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 OPRM1P35372 400 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 BIVMQ86UB2 503 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 C10orf111Q8N326 155 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 DIRC2Q96SL1 478 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 KCNK17Q96T54 332 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 RBM24Q9BX46 236 aaKnown RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 IL23AQ9NPF7 189 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 KLK13Q9UKR3 277 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MUC4Q99102 2169 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 A0A0B4J2E0 115 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 A0A1B0GX12 115 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 C1QL1O75973 258 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 CXorf1O96002 111 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 PPP1CCP36873 323 aaKnown RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 UQCRFS1P47985 274 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 CCR5P51681 352 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 ARL16Q0P5N6 197 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 Q1RN00 199 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TMEM249Q2WGJ8 235 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 PAQR9Q6ZVX9 377 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MED25Q71SY5 747 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 CMTM8Q8IZV2 173 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MMABQ96EY8 250 aaPredicted RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 GUCD1Q96NT3 240 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 AKIRIN1Q9H9L7 192 aaPredicted RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 GPR132Q9UNW8 380 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 HS3ST2Q9Y278 367 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 CACNA1HO95180 2353 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 B9A039 149 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 RER1O15258 196 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 RBFOX2O43251 390 aaKnown RBP eCLIP4.45□□□□□ -1.72e-14■■■■■ 49.8
SKP1-202ENST00000353411 RPS11P62280 158 aaKnown RBP eCLIP4.45□□□□□ -1.7
SKP1-202ENST00000353411 TXNDC8Q6A555 127 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 CXCL17Q6UXB2 119 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 OR51E1Q8TCB6 317 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 RHBDD1Q8TEB9 315 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TXNIPQ9H3M7 391 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 COA3Q9Y2R0 106 aaPredicted RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 PLCE1Q9P212 2302 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TRAV9-2A0A087WT02 112 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 SERTM2A0A1B0GWG4 89 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 GDF9O60383 454 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 PTGER1P34995 402 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 POC1AQ8NBT0 407 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 MRPL24Q96A35 216 aaKnown RBP4.45□□□□□ -1.7
SKP1-202ENST00000353411 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 LRP12Q9Y561 859 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 TMEM131Q92545 1883 aa4.45□□□□□ -1.7
SKP1-202ENST00000353411 OR5B21A6NL26 309 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 OR4C45A6NMZ5 311 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 SPINK4O60575 86 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 SUB1P53999 127 aaKnown RBP eCLIP4.44□□□□□ -1.73e-16■■■■■ 72.7
SKP1-202ENST00000353411 RPL18Q07020 188 aaKnown RBP4.44□□□□□ -1.7
SKP1-202ENST00000353411 SHBQ15464 509 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 CD226Q15762 336 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 PRICKLE4Q2TBC4 344 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 OR8B3Q8NGG8 313 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 OR2T6Q8NHC8 308 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 GPR62Q9BZJ7 368 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 ANXA10Q9UJ72 324 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 LDB3O75112 727 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 ADH4P08319 380 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 ZNF865P0CJ78 1059 aaPredicted RBP4.44□□□□□ -1.7
SKP1-202ENST00000353411 CLDN2P57739 230 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 UNQ9370/PRO34162Q6UXP9 181 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 ALKAL1Q6UXT8 129 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 CYB5D2Q8WUJ1 264 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 C16orf70Q9BSU1 422 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 LINC00597Q9H2U6 94 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 LYRM4Q9HD34 91 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 PTRH2Q9Y3E5 179 aaKnown RBP4.44□□□□□ -1.7
SKP1-202ENST00000353411 LRRC3CA6NJW4 275 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 PRAMEF26H0Y7S4 382 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 TIMP1P01033 207 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 IGLV3-25P01717 112 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 FAHP16930 419 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 ADCYAP1P18509 176 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 HIST1H1AQ02539 215 aaPredicted RBP4.44□□□□□ -1.7
SKP1-202ENST00000353411 OR8B8Q15620 311 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 PRAMEF5Q5TYX0 476 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 FAM69BQ5VUD6 431 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 PRAMEF6Q5VXH4 476 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 FAM71F2Q6NXP2 309 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 OR2I1PQ8NGU4 316 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 AQP3Q92482 292 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 MRGPRX3Q96LB0 322 aa4.44□□□□□ -1.7
SKP1-202ENST00000353411 WSB2Q9NYS7 404 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms