RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RIPPLY2Q5TAB7 128 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 SLC22A25Q6T423 547 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 TMEM182Q6ZP80 229 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-204ENST00000353317 Q6ZPA2 131 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 CPEB3Q8NE35 698 aaKnown RBP7.36□□□□□ -1.23
TRIM55-204ENST00000353317 RARRES2Q99969 163 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 KCNJ16Q9NPI9 418 aa7.36□□□□□ -1.23
TRIM55-204ENST00000353317 TRAV20A0A0B4J274 112 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 IGKV1-12A0A0C4DH73 117 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 GPR37O15354 613 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 SYNGR3O43761 229 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 IL18BPO95998 194 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 IGKV1D-12P01611 117 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 RAB5CP51148 216 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 IL13RA2Q14627 380 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 PDCD1Q15116 288 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 RHEBQ15382 184 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 GUSBP1Q15486 140 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 VWA1Q6PCB0 445 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 SLC35G3Q8N808 338 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 FAM213BQ8TBF2 198 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 SPTSSAQ969W0 71 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 SPSB1Q96BD6 273 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 WNT5BQ9H1J7 359 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 ZMAT5Q9UDW3 170 aaKnown RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 RCL1Q9Y2P8 373 aaKnown RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 HEATR1Q9H583 2144 aaKnown RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 MKRN2OSH3BPM6 223 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 K7N7A8 449 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 PHF1O43189 567 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 TXNL1O43396 289 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 CLN5O75503 358 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 HLA-HP01893 362 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 CRYGSP22914 178 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 KIR2DL2P43627 348 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 RNPS1Q15287 305 aaKnown RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 TSC22D1Q15714 1073 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF324BQ6AW86 544 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 LGI3Q8N145 548 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 ZNF565Q8N9K5 539 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 OR4D5Q8NGN0 318 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 APH1AQ96BI3 265 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 MALSU1Q96EH3 234 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 BOD1Q96IK1 185 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 TP53RKQ96S44 253 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 LINC00470Q9BZP3 86 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 MIOXQ9UGB7 285 aa7.35□□□□□ -1.23
TRIM55-204ENST00000353317 STRAPQ9Y3F4 350 aaKnown RBP7.35□□□□□ -1.23
TRIM55-204ENST00000353317 RPL36A-HNRNPH2H7BZ11 118 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 CST2P09228 141 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 CCL2P13500 99 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 RBP2P50120 134 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 RPS23P62266 143 aaKnown RBP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 POLR2GP62487 172 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 CCL20P78556 96 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 EWSR1Q01844 656 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 FAM209BQ5JX69 171 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 MEX3BQ6ZN04 569 aaKnown RBP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 FBXL14Q8N1E6 418 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 CISD2Q8N5K1 135 aaKnown RBP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 MOB3AQ96BX8 217 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 ABHD14AQ9BUJ0 271 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 PBDC1Q9BVG4 233 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 PUS1Q9Y606 427 aaKnown RBP eCLIP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 SHANK1Q9Y566 2161 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 POLEQ07864 2286 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 PPIHO43447 177 aaKnown RBP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 CLINT1Q14677 625 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 ACSF3Q4G176 576 aaPredicted RBP7.34□□□□□ -1.23
TRIM55-204ENST00000353317 HIKESHIQ53FT3 197 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 NCMAPQ5T1S8 102 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 LURAP1LQ8IV03 231 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 OSR2Q8N2R0 312 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 EDARADDQ8WWZ3 215 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 BORCS8Q96FH0 119 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 YPEL4Q96NS1 127 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 SYT3Q9BQG1 590 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 TCEAL7Q9BRU2 100 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 OR2H1Q9GZK4 316 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 OR51M1Q9H341 326 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 ST3GAL6Q9Y274 331 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 FAM215AQ9Y5M1 114 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 ACACBO00763 2458 aa7.34□□□□□ -1.23
TRIM55-204ENST00000353317 ESPL1Q14674 2120 aa7.34□□□□□ -1.24
TRIM55-204ENST00000353317 A0A1W2PR80 420 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 NKX2-6A6NCS4 301 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 OR6C6A6NF89 314 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 FAM24AA6NFZ4 105 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 AP4M1O00189 453 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 AADACP22760 399 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 GNMTQ14749 295 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 CNN3Q15417 329 aaKnown RBP7.33□□□□□ -1.24
TRIM55-204ENST00000353317 KRTAP27-1Q3LI81 207 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 HEPN1Q6WQI6 88 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ASCL4Q6XD76 172 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 MYPOPQ86VE0 399 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-204ENST00000353317 MCEMP1Q8IX19 187 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF100Q8IYN0 542 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 OR2C3Q8N628 320 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms