RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 BCL3P20749 454 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 NPY4RP50391 375 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 IDH3GP51553 393 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 UCP3P55916 312 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 ZNF345Q14585 488 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 OPCMLQ14982 345 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 VWA1Q6PCB0 445 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 TEX261Q6UWH6 196 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 DHRS11Q6UWP2 260 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 BEND4Q6ZU67 534 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 MYPOPQ86VE0 399 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 Q8IYB0 196 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 ADAD2Q8NCV1 583 aaKnown RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 COQ8AQ8NI60 647 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 SLAMF9Q96A28 289 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 STARD4Q96DR4 205 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 CYYR1Q96J86 154 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 MICU1Q9BPX6 476 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 RTBDNQ9BSG5 229 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 RTL8AQ9BWD3 113 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 OR51I2Q9H344 312 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 RIMS4Q9H426 269 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 RAB18Q9NP72 206 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 MTCH1Q9NZJ7 389 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 ZNF230Q9UIE0 474 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 C14orf166Q9Y224 244 aaKnown RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 U3KQ87 197 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 PRR14LQ5THK1 2151 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 IGKV1D-8A0A087WSZ0 117 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 A0A1B0GWJ7 208 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 SYNGR1O43759 233 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 OR7C1O76099 320 aaPredicted RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 MPC2O95563 127 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 NAPSAO96009 420 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 CELA3BP08861 270 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 AKR1C4P17516 323 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 KITLGP21583 273 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 VAMP1P23763 118 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 CALCRP30988 508 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 S100A11P31949 105 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 GLP1RP43220 463 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 NPBWR2P48146 333 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 UCP2P55851 309 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 SUPT4H1P63272 117 aaKnown RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 CYCSP99999 105 aaKnown RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 OR2T2Q6IF00 324 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 ZNF680Q8NEM1 530 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 OR8H1Q8NGG4 311 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 SLC25A40Q8TBP6 338 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 MSI2Q96DH6 328 aaKnown RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 ZNF2Q9BSG1 426 aaPredicted RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 HDHD3Q9BSH5 251 aaPredicted RBP6.91□□□□□ -1.3
CD44-205ENST00000352818 SFXN3Q9BWM7 321 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 BCL2L14Q9BZR8 327 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 NMES1Q9C002 83 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 FXYD6Q9H0Q3 95 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 ZNF581Q9P0T4 197 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 POLDIP2Q9Y2S7 368 aa6.91□□□□□ -1.3
CD44-205ENST00000352818 FXYD6-FXYD2A0A087WZ82 144 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 TRBV6-7A0A0A0MS04 114 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 CRYM-AS1A6NIL9 109 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 OR5H1A6NKK0 313 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 SDCBPO00560 298 aaPredicted RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 LILRA1O75019 489 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 TSC22D2O75157 780 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 RP2O75695 350 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 PGAM2P15259 253 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 MDH2P40926 338 aaKnown RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 HTR2BP41595 481 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 ERVK11-1P61568 191 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 CR1LQ2VPA4 569 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 MBNL2Q5VZF2 373 aaKnown RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 C11orf87Q6NUJ2 197 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 ZNF474Q6S9Z5 364 aaPredicted RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 SLC22A25Q6T423 547 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 GSG1LQ6UXU4 331 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 Q6ZPA2 131 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 BHLHA15Q7RTS1 189 aaPredicted RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 FAM58AQ8N1B3 248 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 MOB3AQ96BX8 217 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 WDR89Q96FK6 387 aaPredicted RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 MARS2Q96GW9 593 aaKnown RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 ADAT1Q9BUB4 502 aaKnown RBP6.9□□□□□ -1.3
CD44-205ENST00000352818 PDCD10Q9BUL8 212 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 OR2J1Q9GZK6 312 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 TLNRD1Q9H1K6 362 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 ZNF442Q9H7R0 627 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 TREM2Q9NZC2 230 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 COMMD9Q9P000 198 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 KCNS2Q9ULS6 477 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 SLC25A15Q9Y619 301 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 HERC2O95714 4834 aa6.9□□□□□ -1.3
CD44-205ENST00000352818 IGHV2OR16-5A0A0B4J2B6 119 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 A0A0D9SG52 128 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms