RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ATP1A1-AS1Q5TC04 95 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 Q6P435 159 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM178AQ8NBL3 297 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 OR10J5Q8NHC4 309 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 PLPPR1Q8TBJ4 325 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 AKR1E2Q96JD6 320 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 TREM2Q9NZC2 230 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 PIGBOS1A0A0B4J2F0 54 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 ZNF14P17017 642 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-201ENST00000351487 S100GP29377 79 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 MDH2P40926 338 aaKnown RBP18.82■□□□□ 0.6
UPF3A-201ENST00000351487 ARG2P78540 354 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 RTL8AQ9BWD3 113 aa18.82■□□□□ 0.6
UPF3A-201ENST00000351487 C1QL1O75973 258 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 PRH1P02810 166 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 PPT1P50897 306 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 SOX8P57073 446 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 SPATA46Q5T0L3 261 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 MOB1BQ7L9L4 216 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 GMPPAQ96IJ6 420 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-201ENST00000351487 MLXQ9UH92 298 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 LRP5LA4QPB2 252 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 ARGFXA6NJG6 315 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 SPINK2P20155 84 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 PAX6P26367 422 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 VAMP2P63027 116 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 BAXQ07812 192 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 Q8IYB0 196 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 KDF1Q8NAX2 398 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-201ENST00000351487 OR10Z1Q8NGY1 313 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM171Q8WVE6 324 aa18.81■□□□□ 0.6
UPF3A-201ENST00000351487 PROB1E7EW31 1015 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 SMPD2O60906 423 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 ZNF44P15621 663 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 CLINT1Q14677 625 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 WDR86Q86TI4 376 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 ODF3L1Q8IXM7 274 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 LFNGQ8NES3 379 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 MAGT1Q9H0U3 335 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM9BQ9NQ34 198 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 ZNF806P0C7X5 589 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 SLC25A6P12236 298 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 ASCL1P50553 236 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 ERVK11-1P61568 191 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 SHEQ5VZ18 495 aa18.8■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM182Q6ZP80 229 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-201ENST00000351487 MYPOPQ86VE0 399 aaPredicted RBP18.8■□□□□ 0.6
UPF3A-201ENST00000351487 PCNX2A6NKB5 2137 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 TNFSF12O43508 249 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 TMEM50AO95807 157 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 ATP6V0CP27449 155 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 GLRX2Q9NS18 164 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 TAAR3PQ9P1P4 343 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 POLDIP2Q9Y2S7 368 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 RNF115Q9Y4L5 304 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 KLF2Q9Y5W3 355 aaPredicted RBP18.79■□□□□ 0.6
UPF3A-201ENST00000351487 R4GN57 208 aa18.79■□□□□ 0.6
UPF3A-201ENST00000351487 A0A1B0GW64 132 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 UMAD1C9J7I0 102 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 MRPL49Q13405 166 aaKnown RBP18.78■□□□□ 0.6
UPF3A-201ENST00000351487 C3orf80F5H4A9 247 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-201ENST00000351487 CELA3BP08861 270 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 PPP1CBP62140 327 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 SCCPDHQ8NBX0 429 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 OR8G5Q8NG78 346 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 OR10V1Q8NGI7 309 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 PBDC1Q9BVG4 233 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 SMCO4Q9NRQ5 59 aa18.78■□□□□ 0.6
UPF3A-201ENST00000351487 ERRFI1Q9UJM3 462 aaPredicted RBP18.78■□□□□ 0.6
UPF3A-201ENST00000351487 OR8G1Q15617 311 aa18.77■□□□□ 0.6
UPF3A-201ENST00000351487 ZNF497Q6ZNH5 498 aa18.77■□□□□ 0.6
UPF3A-201ENST00000351487 OR5C1Q8NGR4 320 aa18.77■□□□□ 0.6
UPF3A-201ENST00000351487 EIF5A2Q9GZV4 153 aaKnown RBP18.77■□□□□ 0.6
UPF3A-201ENST00000351487 MEX3AA1L020 520 aaKnown RBP18.77■□□□□ 0.59
UPF3A-201ENST00000351487 SLC33A1O00400 549 aaPredicted RBP18.77■□□□□ 0.59
UPF3A-201ENST00000351487 OMGP23515 440 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 TNFSF10P50591 281 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 TGFBR3Q03167 851 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 IGFBP7Q16270 282 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 VASH2Q86V25 355 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 OR2G3Q8NGZ4 309 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 SNIP1Q8TAD8 396 aaKnown RBP18.77■□□□□ 0.59
UPF3A-201ENST00000351487 FAM213BQ8TBF2 198 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 RXFP4Q8TDU9 374 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 OR2J1Q9GZK6 312 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 OR1A1Q9P1Q5 309 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 CLCF1Q9UBD9 225 aa18.77■□□□□ 0.59
UPF3A-201ENST00000351487 A0A1B0GU03 582 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 HSPA12AO43301 675 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 OR2H2O95918 312 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 IGHV1-2P23083 117 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 CDH20Q9HBT6 801 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 A0A0G2JRQ6 117 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 CHST1O43916 411 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 IGLV2-14P01704 120 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 PGA5P0DJD9 388 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 PPP1CCP36873 323 aaKnown RBP18.76■□□□□ 0.59
UPF3A-201ENST00000351487 DYNLT3P51808 116 aa18.76■□□□□ 0.59
UPF3A-201ENST00000351487 UBE2NP61088 152 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms