RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TIAF1O95411 115 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 TMEM50AO95807 157 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 GYPAP02724 150 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 WNT2P09544 360 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 PPIAL4GP0DN37 164 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 CBLN1P23435 193 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 SRP14P37108 136 aaKnown RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 PRRX1P54821 245 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 RPS20P60866 119 aaKnown RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 RPL18Q07020 188 aaKnown RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 EXT1Q16394 746 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 LRRC75AQ8NAA5 344 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 OR2M7Q8NG81 312 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 NXT1Q9UKK6 140 aaKnown RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 KIAA1549LQ6ZVL6 1849 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 SERTM2A0A1B0GWG4 89 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 NKX2-6A6NCS4 301 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 GJE1A6NN92 205 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 RENP00797 406 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 CRISP2P16562 243 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 LHX2P50458 406 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF133P52736 654 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 DLX2Q07687 328 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF765Q7L2R6 523 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 OR4F17Q8NGA8 305 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 OR4F4Q96R69 305 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 P2RX4Q99571 388 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 TMEM59Q9BXS4 323 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 PECRQ9BY49 303 aa9.2□□□□□ -0.94
CAPN3-203ENST00000349748 TBL2Q9Y4P3 447 aaKnown RBP9.2□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF737O75373 536 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 CD226Q15762 336 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 CXorf66Q5JRM2 361 aaPredicted RBP9.19□□□□□ -0.94
CAPN3-203ENST00000349748 OR11L1Q8NGX0 322 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 ASB10Q8WXI3 467 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 C8orf44Q96CB5 159 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 C18orf12Q96KH6 178 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 PLEKHF2Q9H8W4 249 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 HSPB2A8KAH6 182 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 C11orf98E9PRG8 122 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 H3BP45 60 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 CEACAM3P40198 252 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF83P51522 516 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 LCN2P80188 198 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 PAX2Q02962 417 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 HSPB2Q16082 182 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 ABCA11PQ4W5N1 156 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 MPV17L2Q567V2 206 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 LCN12Q6JVE5 192 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 FAM57BQ71RH2 274 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 GATAD1Q8WUU5 269 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 PRO3102Q9H379 93 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 WNT6Q9Y6F9 365 aa9.19□□□□□ -0.94
CAPN3-203ENST00000349748 OR6C6A6NF89 314 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 RBFOX2O43251 390 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■■ 32.4
CAPN3-203ENST00000349748 SLC16A7O60669 478 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 CD99P14209 185 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PMCHP20382 165 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PPP1CBP62140 327 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 RELBQ01201 579 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ZIC1Q15915 447 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 MRGPRGQ86SM5 289 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 LINC00346Q8IVM7 164 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ZNF440Q8IYI8 595 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ZIC4Q8N9L1 334 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ARRDC3Q96B67 414 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 C11orf1Q9H5F2 150 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 NRN1Q9NPD7 142 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 MRPL27Q9P0M9 148 aaKnown RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 SRPXP78539 464 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PSG9Q00887 426 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 MEF2BQ02080 365 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 GATSQ8NAP1 163 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PHF3Q92576 2039 aaKnown RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 C1orf147Q96MC9 270 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 R4GMQ9 66 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 GTF3C1Q12789 2109 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 C9orf172C9J069 976 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 G3V4G9 280 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 PHF1O43189 567 aaPredicted RBP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 SPINT1O43278 529 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 NPIPB7O75200 414 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 TOX4O94842 621 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 IGKV1D-16P01601 117 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 GPX1P07203 203 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 HNRNPA1P09651 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ARG2P78540 354 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 ROM1Q03395 351 aa9.18□□□□□ -0.94
CAPN3-203ENST00000349748 HLA-BQ31612 363 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms