RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ATP23Q9Y6H3 246 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 DIDO1Q9BTC0 2240 aaKnown RBP15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 NEURL1O76050 574 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 PSG2P11465 335 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 MAGEA5P43359 124 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 RPS10P46783 165 aaKnown RBP15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 THNSL2Q86YJ6 484 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 YPEL4Q96NS1 127 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 TECTBQ96PL2 329 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 GSN-AS1Q9NRJ2 163 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 OR1A1Q9P1Q5 309 aa15.43■□□□□ 0.06
PTP4A3-202ENST00000349124 ESPL1Q14674 2120 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 TRAV24A0A0B4J272 114 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 CD300LBA8K4G0 201 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 CLN5O75503 358 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 PMELP40967 661 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 ICAM4Q14773 271 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 SPIN2AQ99865 258 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 SPIN2BQ9BPZ2 258 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 DSPP15924 2871 aaKnown RBP15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 YIF1AO95070 293 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 SLC34A2O95436 690 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 SERPINA7P05543 415 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 TAGLN2P37802 199 aaKnown RBP15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 CLDN18P56856 261 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 KDF1Q8NAX2 398 aaPredicted RBP15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 LFNGQ8NES3 379 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 SEBOXQ9HB31 216 aaPredicted RBP15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 METTL1Q9UBP6 276 aaKnown RBP15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 LOXL2Q9Y4K0 774 aa15.42■□□□□ 0.06
PTP4A3-202ENST00000349124 HSPA12AO43301 675 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 S100A9P06702 114 aaKnown RBP15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 F2RP25116 425 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 HIKESHIQ53FT3 197 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 KIAA2026Q5HYC2 2103 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 C6orf15Q6UXA7 325 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 Q6ZS49 121 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 NUFIP2Q7Z417 695 aaKnown RBP15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 CMTM1Q8IZ96 169 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 OR2M7Q8NG81 312 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 MUCL1Q96DR8 90 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 RSG1Q9BU20 258 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 VSIRQ9H7M9 311 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 MED13Q9UHV7 2174 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 FABP1P07148 127 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 CXCL1P09341 107 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 DUSP3P51452 185 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 HNF4GQ14541 408 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 SSPNQ14714 243 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 SP5Q6BEB4 398 aaPredicted RBP15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 HEPN1Q6WQI6 88 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 LINC00696Q6ZRV3 163 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 TMEM45BQ96B21 275 aa15.41■□□□□ 0.06
PTP4A3-202ENST00000349124 A0A1B0GW64 132 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 SCAF4O95104 1147 aaKnown RBP15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 IAPPP10997 89 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 DLK1P80370 383 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 AKR1C8PQ5T2L2 129 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 ZNF324BQ6AW86 544 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 OR2T2Q6IF00 324 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 ZNF429Q86V71 674 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 POM121L2Q96KW2 1035 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 IGKV3D-15A0A087WSY6 115 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 CA6P23280 308 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 WNT5AP41221 380 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 UBE2KP61086 200 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 ARL16Q0P5N6 197 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 APOBEC3DQ96AK3 386 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 HIST1H2AAQ96QV6 131 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 C12orf49Q9H741 205 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 PPP1R3CQ9UQK1 317 aa15.4■□□□□ 0.06
PTP4A3-202ENST00000349124 KIR2DS1A0A191URI9 304 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 CLEC18AA5D8T8 446 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A10PA6NDY2 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A18PA6NE21 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A16PA6NEW6 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A20PA6NIJ5 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A8PA6NJQ4 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A7PA6NKC0 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A22PA8MWA6 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 KIAA1324LA8MWY0 1029 aaPredicted RBP15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A12PA8MX19 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A5PA8MXJ8 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A23PA8MXZ1 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 IGKV1-39P01597 117 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 IGKV1D-39P04432 117 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A15PP0C7V4 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A13PP0C7W8 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A14PP0C7W9 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 FAM90A24PP0C7X0 464 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 KIR2DS4P43632 304 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 KIR2DS1Q14954 304 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 CLEC18CQ8NCF0 446 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 KIAA1456Q9P272 454 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 WSB1Q9Y6I7 421 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 AP4M1O00189 453 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 TDGF1P13385 188 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 ERVFRD-1P60508 538 aa15.39■□□□□ 0.05
PTP4A3-202ENST00000349124 HOXA4Q00056 320 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms