RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM229BQ8NBD8 167 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 HIST1H2AAQ96QV6 131 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 S100A13Q99584 98 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 DCTN5Q9BTE1 182 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 NUDT15Q9NV35 164 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 MTCH1Q9NZJ7 389 aa13.2□□□□□ -0.3
RAB5C-201ENST00000346213 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 CRTAPO75718 401 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-201ENST00000346213 ACAA1P09110 424 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-201ENST00000346213 AKAIN1P0CW23 69 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 RBP2P50120 134 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 FUT6P51993 359 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 RPS27AP62979 156 aaKnown RBP13.19□□□□□ -0.3
RAB5C-201ENST00000346213 Q6ZTK2 550 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 CHST4Q8NCG5 386 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 OR56B1Q8NGI3 324 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 TNFRSF14Q92956 283 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 SUCNR1Q9BXA5 334 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 BANF2Q9H503 90 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 DOCK11Q5JSL3 2073 aa13.19□□□□□ -0.3
RAB5C-201ENST00000346213 TRAV6A0A075B6T7 132 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 A0A1W2PP11 408 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 FAM230AA0A1W2PPH8 454 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 C7orf66A4D0T2 115 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM235A6NFC5 223 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 RFPL4AA6NLU0 287 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 RFPL4AL1F8VTS6 287 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 TOX4O94842 621 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 GSTP1P09211 210 aaKnown RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 GTF2F2P13984 249 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 TAS2R19P59542 299 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SLC22A6Q4U2R8 563 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 HCP5Q6MZN7 132 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 LHX4Q969G2 390 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 ZMAT3Q9HA38 289 aaKnown RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SIRT7Q9NRC8 400 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 C19orf12Q9NSK7 152 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 MEX3AA1L020 520 aaKnown RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 MEIS3P1A6NDR6 274 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 NOS1APO75052 506 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 GABRA2P47869 451 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 ATP1B3P54709 279 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SLC9A3R2Q15599 337 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 FAM216AQ8WUB2 273 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SLAMF9Q96A28 289 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SDSLQ96GA7 329 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 ST6GAL2Q96JF0 529 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 MCUBQ9NWR8 336 aa13.18□□□□□ -0.3
RAB5C-201ENST00000346213 SLC25A10Q9UBX3 287 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-201ENST00000346213 IGKV1-12A0A0C4DH73 117 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 RNASEK-C17orf49H0YIS7 233 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 SOCS1O15524 211 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 IGKV1D-12P01611 117 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM225BP0DP42 221 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 MGMTP16455 207 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 RCVRNP35243 200 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 NPBWR2P48146 333 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 TMEM50BP56557 158 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 RAB25P57735 213 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 IL13RA1P78552 427 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 PNLIPRP3Q17RR3 467 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 CD276Q5ZPR3 534 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 SLC36A1Q7Z2H8 476 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
RAB5C-201ENST00000346213 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-201ENST00000346213 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB5C-201ENST00000346213 ONECUT1Q9UBC0 465 aa13.17□□□□□ -0.3
RAB5C-201ENST00000346213 A0A0U1RQK1 487 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 FOXI3A8MTJ6 420 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-201ENST00000346213 NDUFB3O43676 98 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 NDUFB6O95139 128 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 CYB5AP00167 134 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 CD74P04233 296 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 CD3DP04234 171 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 HIST1H1DP16402 221 aaKnown RBP13.16□□□□□ -0.3
RAB5C-201ENST00000346213 GNB3P16520 340 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 SERPINA2P20848 420 aa13.16□□□□□ -0.3
RAB5C-201ENST00000346213 RRAS2P62070 204 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-201ENST00000346213 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms