RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TMPRSS3P57727 454 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 GMFBP60983 142 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 RAP2BP61225 183 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 IL24Q13007 206 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 EXOSC2Q13868 293 aaKnown RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 RNF212Q495C1 297 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 SLC22A25Q6T423 547 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 GFRALQ6UXV0 394 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 HSD17B13Q7Z5P4 300 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 PEG10Q86TG7 708 aaKnown RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM58AQ8N1B3 248 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 SNRNP40Q96DI7 357 aaKnown RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF2Q9BSG1 426 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 REG4Q9BYZ8 158 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 PKIBQ9C010 78 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 RCC2Q9P258 522 aaKnown RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 RELNP78509 3460 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ARID1AO14497 2285 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 KIAA2026Q5HYC2 2103 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 A0A0G2JNJ9 132 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 M0R1B8 84 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 PRRG2O14669 202 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 SLC31A2O15432 143 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 GRPP07492 148 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ACAA1P09110 424 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 SSTR2P30874 369 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 DEFA6Q01524 100 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 NAAAQ02083 359 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF154Q13106 437 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 OR8G1Q15617 311 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF660Q6AZW8 331 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAHD2BQ6P2I3 314 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-202ENST00000345734 MITD1Q8WV92 249 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 FAHD2AQ96GK7 314 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM100Q9NV29 134 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 ASF1BQ9NVP2 202 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 Q9UFV3 132 aa7.82□□□□□ -1.16
ATG4A-202ENST00000345734 PIEZO1Q92508 2521 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 LRP5LA4QPB2 252 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 EEF1E1-BLOC1S5C9J1V9 151 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 CDIPTO14735 213 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 HS3ST1O14792 307 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TIMM8AO60220 97 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 RBMXP38159 391 aaKnown RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 DHODHQ02127 395 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 MPPED2Q15777 294 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 MPV17LQ2QL34 196 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 HFEQ30201 348 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 PAN3Q58A45 887 aaKnown RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TIMM23BQ5SRD1 257 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM211Q6ICI0 200 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 Q6ZR03 302 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 KCTD9Q7L273 389 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 SSX9Q7RTT3 188 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 SUMF2Q8NBJ7 301 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM185AQ8NFB2 350 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 WDR13Q9H1Z4 485 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 MSL2Q9HCI7 577 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 CHMP1AQ9HD42 196 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 NIT2Q9NQR4 276 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 NECAP2Q9NVZ3 263 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 MIOXQ9UGB7 285 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 NBASA2RRP1 2371 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TRAV24A0A0B4J272 114 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 A8MXE2 369 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 EIF3GO75821 320 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 RNF224P0DH78 156 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 PGAM2P15259 253 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 KITLGP21583 273 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 GPX4P36969 197 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 PMELP40967 661 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TAS2R31P59538 309 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
ATG4A-202ENST00000345734 SLC9A3R2Q15599 337 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF718Q3SXZ3 478 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM128Q5BJH2 165 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 OR8G5Q8NG78 346 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 NEK7Q8TDX7 302 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 RDH5Q92781 318 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 SCGB3A2Q96PL1 93 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 PHB2Q99623 299 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 GPR61Q9BZJ8 451 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 DNTTIP1Q9H147 329 aa7.81□□□□□ -1.16
ATG4A-202ENST00000345734 ROS1P08922 2347 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 PLSCR5A0PG75 271 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 MCRIP1C9JLW8 97 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 SFT2D2O95562 160 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 DUS4LO95620 317 aaKnown RBP7.8□□□□□ -1.16
ATG4A-202ENST00000345734 NAPSAO96009 420 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 KNG1P01042 644 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 FGF2P09038 288 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 PPP3CBP16298 524 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 CXCL2P19875 107 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 FCGR2CP31995 323 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms