RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 OTX1P32242 354 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 UNQ9370/PRO34162Q6UXP9 181 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 GMPPAQ96IJ6 420 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 TUBA4BQ9H853 241 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 SCN1AP35498 2009 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-202ENST00000345356 TMEM211Q6ICI0 200 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 POC1AQ8NBT0 407 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 TMEM116Q8NCL8 245 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 OR10S1Q8NGN2 331 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 KCNE4Q8WWG9 221 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 NHSQ6T4R5 1651 aa10.61□□□□□ -0.71
COL12A1-202ENST00000345356 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 IGHV3-43A0A0B4J1X8 118 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 IGHV3-43DP0DP04 118 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 SPPL3Q8TCT6 385 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 Q8WTZ3 238 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 GALNT14Q96FL9 552 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 COL25A1Q9BXS0 654 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 AAMDCQ9H7C9 122 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 MELTFP08582 738 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 ST6GALNAC3Q8NDV1 305 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 HEXA-AS1Q9H8Q6 139 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 COL10A1Q03692 680 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 SLC35E4Q6ICL7 350 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 PDPNQ86YL7 162 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 OR5R1Q8NH85 324 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 TMEM140Q9NV12 185 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 ARAP2Q8WZ64 1704 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 LOC390937A0A1W2PQ73 354 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 OR4C46A6NHA9 309 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 TNFSF10P50591 281 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 CXorf66Q5JRM2 361 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF519Q8TB69 540 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF296Q8WUU4 475 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 TMEM230Q96A57 120 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 OR2V2Q96R30 315 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 YBX2Q9Y2T7 364 aaKnown RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 TRBV5-7A0A0A0MS05 114 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 A0A1W2PN81 502 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 A0A1W2PP11 408 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 HIST1H1EP10412 219 aaKnown RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 CXorf67Q86X51 503 aaPredicted RBP10.6□□□□□ -0.71
COL12A1-202ENST00000345356 OR52M1Q8NGK5 317 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 SAP30LQ9HAJ7 183 aa10.6□□□□□ -0.71
COL12A1-202ENST00000345356 KNL1Q8NG31 2342 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 UPK3AO75631 287 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 ZNF708P17019 499 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 OR8B3Q8NGG8 313 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 ABHD3Q8WU67 409 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 TOX2Q96NM4 488 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 RBKSQ9H477 322 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-202ENST00000345356 ZCCHC14Q8WYQ9 949 aaKnown RBP10.59□□□□□ -0.71
COL12A1-202ENST00000345356 R3HDM4Q96D70 268 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 CDCA3Q99618 268 aaPredicted RBP10.59□□□□□ -0.71
COL12A1-202ENST00000345356 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 FCGR3AP08637 254 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 FGF5P12034 268 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 COL8A1P27658 744 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 RIGQ13278 110 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 NIT1Q86X76 327 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 VSTM2LQ96N03 204 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 A0A0G2JK05 382 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 PATE4P0C8F1 98 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 PNLIPP16233 465 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 OR4F17Q8NGA8 305 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 SLX1AQ9BQ83 275 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 OR2W1Q9Y3N9 320 aa10.59□□□□□ -0.71
COL12A1-202ENST00000345356 RAMP1O60894 148 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 HLA-DQA1P01909 254 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 ORM2P19652 201 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SRSF9Q13242 221 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL12A1-202ENST00000345356 PRSS53Q2L4Q9 553 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 KIAA1644Q3SXP7 199 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 CLN8Q9UBY8 286 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SRIP30626 198 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SLC25A28Q96A46 364 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SPACA9Q96E40 222 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-202ENST00000345356 ADTRPQ96IZ2 230 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 AMELYQ99218 206 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.58□□□□□ -0.72
COL12A1-202ENST00000345356 MTURNQ8N3F0 131 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 ABHD14AQ9BUJ0 271 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 SLC22A20A6NK97 555 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 RBP4P02753 201 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 FUT5Q11128 374 aa10.58□□□□□ -0.72
COL12A1-202ENST00000345356 RABEPKQ7Z6M1 372 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms