RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 RPRMLQ8N4K4 120 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 SNRNP40Q96DI7 357 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 MALSU1Q96EH3 234 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 ADAT1Q9BUB4 502 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 CACFD1Q9UGQ2 172 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 A0A1B0GW64 132 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 MSGN1A6NI15 193 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 E5RGE8 158 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 MSTNO14793 375 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 DEDDO75618 318 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 ADAP1O75689 374 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 IGLV1-44P01699 117 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 RAC2P15153 192 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 SELEP16581 610 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 AGAP20933 346 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 LPAR6P43657 344 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 SNU13P55769 128 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 HABP2Q14520 560 aaPredicted RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 AADACL3Q5VUY0 350 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 RPL7L1Q6DKI1 246 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 OR13G1Q8NGZ3 307 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 PECRQ9BY49 303 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 TMEM231Q9H6L2 316 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 UNKLQ9H9P5 680 aaKnown RBP10.95□□□□□ -0.66
CLK3-201ENST00000345005 EHFQ9NZC4 300 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 GSKIPQ9P0R6 139 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 ZNF835Q9Y2P0 537 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 PRR14LQ5THK1 2151 aa10.95□□□□□ -0.66
CLK3-201ENST00000345005 CACNA1BQ00975 2339 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OR5B21A6NL26 309 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 FCGR2CP31995 323 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 CD80P33681 288 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 GPM6AP51674 278 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 RBPJQ06330 500 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 IAH1Q2TAA2 248 aaPredicted RBP10.94□□□□□ -0.66
CLK3-201ENST00000345005 TIMM23BQ5SRD1 257 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 SPATA46Q5T0L3 261 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OR2T2Q6IF00 324 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 MKXQ8IYA7 352 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 C1orf174Q8IYL3 243 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OSR2Q8N2R0 312 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 BHLHE23Q8NDY6 225 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OR1J1Q8NGS3 322 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 HPSE2Q8WWQ2 592 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OR5P3Q8WZ94 311 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 C14orf79Q96F83 325 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 OR2J1Q9GZK6 312 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 DECR2Q9NUI1 292 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 FAM96BQ9Y3D0 163 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 SLC25A15Q9Y619 301 aa10.94□□□□□ -0.66
CLK3-201ENST00000345005 IGKV1-12A0A0C4DH73 117 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 ZNF732B4DXR9 585 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 FAM157AC9JC47 383 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 IGKV1D-12P01611 117 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 SFTPBP07988 381 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 CECR9P0C854 216 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 GABRR1P24046 479 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 NFYBP25208 207 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 SNRPEP62304 92 aaKnown RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 GNG3P63215 75 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 RELQ04864 619 aaPredicted RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 DHRS11Q6UWP2 260 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 Q6ZRG5 221 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 CALHM1Q8IU99 346 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 Q8NFD4 153 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 SLC25A40Q8TBP6 338 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 GTF3AQ92664 365 aaKnown RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 HIST1H2BAQ96A08 127 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 RPS10P5Q9NQ39 176 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 PLEKHJ1Q9NW61 149 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 CRIM1Q9NZV1 1036 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 HSF4Q9ULV5 492 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 NBEAQ8NFP9 2946 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 IFNA10P01566 189 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 IFNA17P01571 189 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 DANCRP0C864 163 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 GLRA1P23415 457 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 MAS1LP35410 378 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 SNCAP37840 140 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 RBM39Q14498 530 aaKnown RBP10.93□□□□□ -0.66
CLK3-201ENST00000345005 ITPR1Q14643 2758 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 C3orf36Q3SXR2 165 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 ZNF573Q86YE8 665 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 C1QL4Q86Z23 238 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 C2CD4CQ8TF44 421 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 MUCL1Q96DR8 90 aa10.93□□□□□ -0.66
CLK3-201ENST00000345005 ST6GALNAC5Q9BVH7 336 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms