RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR5B21A6NL26 309 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TGFAP01135 160 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 MS4A4AQ96JQ5 239 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PGPEP1Q9NXJ5 209 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SCN11AQ9UI33 1791 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PPICP45877 212 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CTXN3Q4LDR2 81 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR52I1Q8NGK6 324 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 C10orf35Q96D05 121 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 LINC00470Q9BZP3 86 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OBP2BQ9NPH6 170 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 HDGFL3Q9Y3E1 203 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SPHKAPQ2M3C7 1700 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TRBV5-3A0A0A0MS03 114 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PRR33A8MZF0 331 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TMPRSS11DO60235 418 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CEACAM1P13688 526 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ANKRD37Q7Z713 158 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR11G2Q8NGC1 345 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR10AD1Q8NGE0 317 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PIGTQ969N2 578 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 C1orf43Q9BWL3 253 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SPHK2Q9NRA0 654 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 LAMTOR5O43504 91 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 FAM157CP0CG43 387 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SAMD5Q5TGI4 173 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CDRT4Q8N9R6 151 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SSSCA1O60232 199 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TNFAIP6P98066 277 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR52B6Q8NGF0 335 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 KHSRPQ92945 711 aaKnown RBP eCLIP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SMOQ99835 787 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SPAG8Q99932 426 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ACP5P13686 325 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 C2orf15Q8WU43 125 aaKnown RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM45BQ96B21 275 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CHCHD1Q96BP2 118 aaKnown RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RNF181Q9P0P0 153 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 FNDC7Q5VTL7 733 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 Q6Q795 121 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR11H4Q8NGC9 324 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SHPRHQ149N8 1683 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 C11orf94C9JXX5 98 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR4A8P0C604 315 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CD46P15529 392 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CPOQ8IVL8 374 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 H3BML4 177 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NTHL1P78549 312 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 NOXO1Q8NFA2 376 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OR52I2Q8NH67 350 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 AAMDCQ9H7C9 122 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 G6PC2Q9NQR9 355 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 AURKAIP1Q9NWT8 199 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 CXorf49A8MYA2 514 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-202ENST00000344113 GJB3O75712 270 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SLC2A10O95528 541 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 PTGER4P35408 488 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 FOXL2P58012 376 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SKP2Q13309 424 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 Q8IYB0 196 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 R3HDMLQ9H3Y0 253 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 RTN4RL2Q86UN3 420 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 GREM2Q9H772 168 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 SH2D2AQ9NP31 389 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1B0GX51 115 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 COX7A2P2O60397 106 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 OPRK1P41145 380 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 IFT172Q9UG01 1749 aa3.33□□□□□ -1.88
SYNE2-202ENST00000344113 ELAVL4P26378 380 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 HRH1P35367 487 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 C12orf73Q69YU5 71 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ATP6V0E2Q8NHE4 81 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 C17orf51A8MQB3 221 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 IL2RAP01589 272 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF542PQ5EBM4 170 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SORL1Q92673 2214 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TCRBV5S1A1TA0A578 114 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF880Q6PDB4 577 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 KCNS1Q96KK3 526 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 NTMQ9P121 344 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TCRBV16S1A1N1A0A5B0 115 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL2P19875 107 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CD40P25942 277 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 LSM6P62312 80 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 HSD11B1LQ7Z5J1 315 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF707Q96C28 371 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PDCD1LG2Q9BQ51 273 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM140Q9NV12 185 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ROS1P08922 2347 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 P01737 135 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 JMJD7P0C870 316 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PLD4Q96BZ4 506 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SH2D7A6NKC9 451 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 INAFM2P0DMQ5 153 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 VIPR2P41587 438 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RPS15AP62244 130 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 DOK3Q7L591 496 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 NPFFR1Q9GZQ6 430 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms