RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 VAMP8Q9BV40 100 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 NXF5Q9H1B4 397 aaKnown RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 DXOO77932 396 aaKnown RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 FCGR2AP12318 317 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 PDLIM4P50479 330 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 RANP62826 216 aaKnown RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 UBE2V1Q13404 147 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 SPIN3Q5JUX0 258 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 WFDC8Q8IUA0 241 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 MCEMP1Q8IX19 187 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 FAM89BQ8N5H3 189 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 ADAMTS18Q8TE60 1221 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 SCARF2Q96GP6 870 aaPredicted RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 LYRM2Q9NU23 88 aaPredicted RBP11.9□□□□□ -0.5
SYDE1-201ENST00000342784 HRASLS2Q9NWW9 162 aa11.9□□□□□ -0.5
SYDE1-201ENST00000342784 HRASP01112 189 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 CTSBP07858 339 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 ZNF121P58317 390 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 Q6ZVH6 145 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 OR8B12Q8NGG6 310 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 PNO1Q9NRX1 252 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 IGKV1D-43A0A0B4J1Z2 117 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 CDS2O95674 445 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 OR1D4P47884 311 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 ZFP36L1Q07352 338 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 CST6Q15828 149 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 VWA1Q6PCB0 445 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 KCNIP4Q6PIL6 250 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 BAHD1Q8TBE0 780 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 ZCCHC14Q8WYQ9 949 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 EMC6Q9BV81 110 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 THAP10Q9P2Z0 257 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 PRSS38A1L453 326 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 APOBEC3AP31941 199 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 CXorf66Q5JRM2 361 aaPredicted RBP11.89□□□□□ -0.51
SYDE1-201ENST00000342784 ATP5SQ99766 215 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 MOB1AQ9H8S9 216 aa11.89□□□□□ -0.51
SYDE1-201ENST00000342784 PROB1E7EW31 1015 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 F6UZH7 168 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 H3BP45 60 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 TRAPPC6AO75865 159 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 NDUFB8O95169 186 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 TDGF1P13385 188 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 GNRHRP30968 328 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 ZNF133P52736 654 aaPredicted RBP11.88□□□□□ -0.51
SYDE1-201ENST00000342784 PPP1CAP62136 330 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 HSF1Q00613 529 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 RTP5Q14D33 572 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 PARM1Q6UWI2 310 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 GRINAQ7Z429 371 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 PIGTQ969N2 578 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 UMODP07911 640 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 CD33P20138 364 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 SRPXP78539 464 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 IL24Q13007 206 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 TESK1Q15569 626 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 UEVLDQ8IX04 471 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 FGF14Q92915 247 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 SLC35E1Q96K37 410 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 SLC46A1Q96NT5 459 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 P2RX4Q99571 388 aa11.88□□□□□ -0.51
SYDE1-201ENST00000342784 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
SYDE1-201ENST00000342784 HCRTR1O43613 425 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 PDGFBP01127 241 aaPredicted RBP11.87□□□□□ -0.51
SYDE1-201ENST00000342784 BAXQ07812 192 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 HLA-DQA1Q5Y7H0 255 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 DOK3Q7L591 496 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 OR10S1Q8NGN2 331 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 PYGO2Q9BRQ0 406 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 PLA2G2FQ9BZM2 168 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 LIME1Q9H400 295 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 ZNF286AQ9HBT8 521 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 ADAM20O43506 726 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 TNFSF13O75888 250 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 RPS21P63220 83 aaKnown RBP11.87□□□□□ -0.51
SYDE1-201ENST00000342784 OCIAD2Q56VL3 154 aa11.87□□□□□ -0.51
SYDE1-201ENST00000342784 ACTL10Q5JWF8 245 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms