RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RAG2P55895 527 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 C19orf57Q0VDD7 668 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 GUCA2BQ16661 112 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-202ENST00000342494 NEU3Q9UQ49 428 aa13.09□□□□□ -0.31
UBE3B-202ENST00000342494 DAOP14920 347 aa13.08□□□□□ -0.31
UBE3B-202ENST00000342494 MMP26Q9NRE1 261 aa13.08□□□□□ -0.31
UBE3B-202ENST00000342494 WASHC3Q9Y3C0 194 aa13.08□□□□□ -0.31
UBE3B-202ENST00000342494 NGFRP08138 427 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 HIST1H3AP68431 136 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 PSG4Q00888 419 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 STARD4Q96DR4 205 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 AUP1Q9Y679 476 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 IGHV3-21A0A0B4J1V1 117 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 CLDN34H7C241 214 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 GAPDHP04406 335 aaKnown RBP13.08□□□□□ -0.32
UBE3B-202ENST00000342494 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 PF4V1P10720 104 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 DNASE2BQ8WZ79 361 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 Q9N2K0 584 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 J3QR06 171 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 MGST3O14880 152 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 RAB29O14966 203 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 TMEM33P57088 247 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 KLRB1Q12918 225 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 RNF115Q9Y4L5 304 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 J3QR89 54 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 NPY1RP25929 384 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 PRR13Q9NZ81 148 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 HS3ST3B1Q9Y662 390 aa13.08□□□□□ -0.32
UBE3B-202ENST00000342494 IGKV1D-16P01601 117 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 UQCC3Q6UW78 93 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 ABHD1Q96SE0 405 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 C1QAP02745 245 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
UBE3B-202ENST00000342494 P2RY1P47900 373 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 TPRX1Q8N7U7 411 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 DYRK2Q92630 601 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 U3KQ87 197 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 ZP4Q12836 540 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
UBE3B-202ENST00000342494 HPXP02790 462 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 COL8A1P27658 744 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 MARS2Q96GW9 593 aaKnown RBP13.06□□□□□ -0.32
UBE3B-202ENST00000342494 PGLYRP3Q96LB9 341 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 SLC35B3Q9H1N7 401 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 PRSS50Q9UI38 385 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 A0A1W2PNV4 684 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 CRXO43186 299 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-202ENST00000342494 MGPP08493 103 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 ZNF154Q13106 437 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 TMEM97Q5BJF2 176 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 FDX2Q6P4F2 183 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 MRGPRGQ86SM5 289 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 P01737 135 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 VAMP3Q15836 100 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 ADAT3Q96EY9 351 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-202ENST00000342494 MANBALQ9NQG1 85 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 HAX1O00165 279 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 VSIG8P0DPA2 414 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 IL17BQ9UHF5 180 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 ZDHHC8Q9ULC8 765 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 IGSF23A1L1A6 192 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-202ENST00000342494 FCARP24071 287 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 CSF2RBP32927 897 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 TFPI2P48307 235 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 CDCP2Q5VXM1 449 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 STXBP6Q8NFX7 210 aa13.06□□□□□ -0.32
UBE3B-202ENST00000342494 ROM1Q03395 351 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 CSRP2Q16527 193 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 IZUMO4Q1ZYL8 232 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 CEACAM21Q3KPI0 293 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 TMEM74BQ9NUR3 256 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 NPIPB8E9PQR5 432 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 IFNL4K9M1U5 179 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 RBM11P57052 281 aaKnown RBP13.05□□□□□ -0.32
UBE3B-202ENST00000342494 AANATQ16613 207 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 SRD5A3Q9H8P0 318 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
UBE3B-202ENST00000342494 CENPVL1A0A0U1RR11 272 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 BMPR1BO00238 502 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 TSPAN2O60636 221 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 PRSS1P07477 247 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
UBE3B-202ENST00000342494 WDR73Q6P4I2 378 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 CLEC9AQ6UXN8 241 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
UBE3B-202ENST00000342494 ASXL3Q9C0F0 2248 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms