RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PLXNA3P51805 1871 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 LSM6P62312 80 aaKnown RBP11.75□□□□□ -0.53
TMEM248-201ENST00000341567 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 ZNF90Q03938 601 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 ENDOGQ14249 297 aaKnown RBP11.75□□□□□ -0.53
TMEM248-201ENST00000341567 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 RHOVQ96L33 236 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
TMEM248-201ENST00000341567 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 PRR14LQ5THK1 2151 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 CALCRP30988 508 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 PPP1CCP36873 323 aaKnown RBP11.75□□□□□ -0.53
TMEM248-201ENST00000341567 GABRA4P48169 554 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 RBPJQ06330 500 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 GFRALQ6UXV0 394 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 ZNF519Q8TB69 540 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 ERGIC1Q969X5 290 aa11.75□□□□□ -0.53
TMEM248-201ENST00000341567 SP1P08047 785 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 NAAAQ02083 359 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 STPG1Q5TH74 334 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 LINC00587B1AMM8 73 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 C17orf112F2Z3M2 114 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 DBX2Q6ZNG2 339 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 LIAT1Q6ZQX7 453 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 PPP1R32Q7Z5V6 425 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 CYB561D1Q8N8Q1 229 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 GFI1Q99684 422 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 GPR87Q9BY21 358 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 AQP7O14520 342 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 PDCD6O75340 191 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 FTH1P19P0C7X4 201 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 FOSL1P15407 271 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 SULT1A2P50226 295 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 EWSR1Q01844 656 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM248-201ENST00000341567 FAM58AQ8N1B3 248 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 OR2J1Q9GZK6 312 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 PRSS50Q9UI38 385 aa11.74□□□□□ -0.53
TMEM248-201ENST00000341567 PLXND1Q9Y4D7 1925 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 G3V3Q6 166 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 H0YL77 283 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 FGF7P21781 194 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 PRAMEF5Q5TYX0 476 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 PRAMEF6Q5VXH4 476 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 TIPARPQ7Z3E1 657 aaKnown RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 CISD2Q8N5K1 135 aaKnown RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 ANGPTL4Q9BY76 406 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 GPR61Q9BZJ8 451 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 ZDHHC11Q9H8X9 412 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 TERTO14746 1132 aaKnown RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 LYPD3O95274 346 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 NGFP01138 241 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 TRGC2P03986 189 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 IL13RA2Q14627 380 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 CLDN23Q96B33 292 aa11.73□□□□□ -0.53
TMEM248-201ENST00000341567 PACRGQ96M98 296 aaPredicted RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
TMEM248-201ENST00000341567 SELEP16581 610 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 BCL3P20749 454 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 PPP1CBP62140 327 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 ROM1Q03395 351 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 LY6G6FQ5SQ64 297 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 WISP1O95388 367 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 KRTDAPP60985 99 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 TOMM20LQ6UXN7 152 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 RARRES2Q99969 163 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 POMT1Q9Y6A1 747 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 PRUNE2Q8WUY3 3088 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 TGOLN2O43493 480 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 OPN1MWP04001 364 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 HEXAP06865 529 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 OPN1MW2P0DN77 364 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 OPN1MW3P0DN78 364 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-201ENST00000341567 NSUN5P2Q63ZY6 315 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 C1QL2Q7Z5L3 287 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 MYPOPQ86VE0 399 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-201ENST00000341567 GAPTQ8N292 157 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 POC1BQ8TC44 478 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
TMEM248-201ENST00000341567 ZNF107Q9UII5 783 aaPredicted RBP11.72□□□□□ -0.53
TMEM248-201ENST00000341567 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms