RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ABI3Q9P2A4 366 aa16.15■□□□□ 0.18
PSPC1-201ENST00000338910 FAM24AA6NFZ4 105 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF850A8MQ14 1090 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 PITX3O75364 302 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 IGHV3-9P01782 118 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 LBHQ53QV2 105 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF774Q6NX45 483 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 OR5L1Q8NGL2 311 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 OR5R1Q8NH85 324 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 PACRGQ96M98 296 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-201ENST00000338910 URB1O60287 2271 aaKnown RBP16.14■□□□□ 0.17
PSPC1-201ENST00000338910 FAM230AA0A1W2PPH8 454 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 FAHP16930 419 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 OPRM1P35372 400 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 MAGEA5P43359 124 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 FXYD4P59646 89 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 SNAI3Q3KNW1 292 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 ABLIM2Q6H8Q1 611 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 PRSS33Q8NF86 280 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 TMEM171Q8WVE6 324 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF703Q9H7S9 590 aaPredicted RBP16.14■□□□□ 0.17
PSPC1-201ENST00000338910 TMEM38BQ9NVV0 291 aa16.14■□□□□ 0.17
PSPC1-201ENST00000338910 IGSF23A1L1A6 192 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 MKRN2OSH3BPM6 223 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 PHOX2AO14813 284 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 OTX1P32242 354 aaPredicted RBP16.13■□□□□ 0.17
PSPC1-201ENST00000338910 CEACAM16Q2WEN9 425 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 SLC22A25Q6T423 547 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 SPTSSAQ969W0 71 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 FAM210BQ96KR6 192 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 FER1L6-AS2Q96M78 137 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 HIST1H2BLQ99880 126 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 FAAP24Q9BTP7 215 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 SLC25A31Q9H0C2 315 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 LAMA5O15230 3695 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 IL2RGP31785 369 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 RELQ04864 619 aaPredicted RBP16.13■□□□□ 0.17
PSPC1-201ENST00000338910 SSX2Q16385 188 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 CLDND2Q8NHS1 167 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 CPT1CQ8TCG5 803 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 PIGTQ969N2 578 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 MISP3Q96FF7 219 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 SSX3Q99909 188 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 B4GALT7Q9UBV7 327 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 V9GYS6 101 aa16.13■□□□□ 0.17
PSPC1-201ENST00000338910 A0A0U1RQV5 110 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 ATXN7O15265 892 aaPredicted RBP16.12■□□□□ 0.17
PSPC1-201ENST00000338910 CYTIPO60759 359 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 DHRS3O75911 302 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 DTYMKP23919 212 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 DPPA2Q7Z7J5 298 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 SLC35G3Q8N808 338 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 PP6455Q8WZ26 134 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 RCC1LQ96I51 464 aaKnown RBP16.12■□□□□ 0.17
PSPC1-201ENST00000338910 TTTY12Q9BZ98 90 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 PIGLQ9Y2B2 252 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 SHANK1Q9Y566 2161 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF407Q9C0G0 2248 aa16.12■□□□□ 0.17
PSPC1-201ENST00000338910 B4DEV8 164 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF32P17041 273 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 PRSS12P56730 875 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 SPCS3P61009 180 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 HLA-DRB3P79483 266 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 OR11L1Q8NGX0 322 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 OR2AE1Q8NHA4 323 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 FOXB1Q99853 325 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 HIPK2Q9H2X6 1198 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 DNAJC13O75165 2243 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 SYNGR3O43761 229 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 LHX2P50458 406 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 C1orf87Q8N0U7 546 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 FGFBP3Q8TAT2 258 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF581Q9P0T4 197 aa16.11■□□□□ 0.17
PSPC1-201ENST00000338910 SMCO3A2RU48 225 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 PHF1O43189 567 aaPredicted RBP16.1■□□□□ 0.17
PSPC1-201ENST00000338910 HSPA12AO43301 675 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 CST2P09228 141 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 CEACAM6P40199 344 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 RND2P52198 227 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 PLGLB1Q02325 96 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 RAB35Q15286 201 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 AKR1C8PQ5T2L2 129 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 VASH2Q86V25 355 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 RBMXL1Q96E39 390 aaKnown RBP16.1■□□□□ 0.17
PSPC1-201ENST00000338910 SYT3Q9BQG1 590 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 GPR35Q9HC97 309 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 GVINP1Q7Z2Y8 2422 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 TGOLN2O43493 480 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 CRYGSP22914 178 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 OMGP23515 440 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 TMEM251Q8N6I4 163 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 OR1F12Q8NHA8 337 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 TP53TG5Q9Y2B4 290 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 FAM186AA6NE01 2351 aa16.1■□□□□ 0.17
PSPC1-201ENST00000338910 NKX2-6A6NCS4 301 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 CDS2O95674 445 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 CLDN18P56856 261 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 PSG4Q00888 419 aa16.09■□□□□ 0.17
PSPC1-201ENST00000338910 SRSF6Q13247 344 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms