RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 TCN2P20062 427 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 NPBWR2P48146 333 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 PDLIM4P50479 330 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 CNN3Q15417 329 aaKnown RBP17.5■□□□□ 0.39
RUNX3-202ENST00000338888 TMEM241Q24JQ0 296 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 WDR5BQ86VZ2 330 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 CLEC18CQ8NCF0 446 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 TMEM170AQ8WVE7 144 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 SPTSSAQ969W0 71 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 NABP1Q96AH0 204 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 RPUSD4Q96CM3 377 aaKnown RBP17.5■□□□□ 0.39
RUNX3-202ENST00000338888 OR5B12Q96R08 314 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 IGKV1D-13A0A0B4J2D9 117 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 IGKV1-13P0DP09 117 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 PLA2G5P39877 138 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 ELLP55199 621 aaPredicted RBP17.5■□□□□ 0.39
RUNX3-202ENST00000338888 BSXQ3C1V8 233 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 SLC25A53Q5H9E4 307 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 KIAA0895LQ68EN5 471 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 TMEM211Q6ICI0 200 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 MRGPRGQ86SM5 289 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 METTL7AQ9H8H3 244 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 PLSCR2Q9NRY7 297 aa17.5■□□□□ 0.39
RUNX3-202ENST00000338888 AQP7P3A6NL99 342 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 IZUMO4Q1ZYL8 232 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 FAM69BQ5VUD6 431 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 TGIF2LYQ8IUE0 185 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 CCL28Q9NRJ3 127 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 KIAA2026Q5HYC2 2103 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 CHD3Q12873 2000 aaKnown RBP17.49■□□□□ 0.39
RUNX3-202ENST00000338888 A0A0G2JRQ6 117 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 ZNF737O75373 536 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 HERPUD1Q15011 391 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 ASCL4Q6XD76 172 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 ZNF295-AS1Q8N0V1 137 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 OR10G3Q8NGC4 313 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 RLN3Q8WXF3 142 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 ZNF385AQ96PM9 386 aaKnown RBP17.49■□□□□ 0.39
RUNX3-202ENST00000338888 IL17BQ9UHF5 180 aa17.49■□□□□ 0.39
RUNX3-202ENST00000338888 IGHV3-15A0A0B4J1V0 119 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 MARCH11A6NNE9 402 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 B4E171 279 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 SCTP09683 121 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 UCP1P25874 307 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 TSPAN7P41732 249 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 RPL23P62829 140 aaKnown RBP17.48■□□□□ 0.39
RUNX3-202ENST00000338888 DEFB133Q30KQ1 61 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 ZNF837Q96EG3 531 aaPredicted RBP17.48■□□□□ 0.39
RUNX3-202ENST00000338888 MYOTQ9UBF9 498 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 FER1L5A0AVI2 2057 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 NRASP01111 189 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 OR8B8Q15620 311 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 CYP2G1PQ6ZSU1 146 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 LHFPL2Q6ZUX7 228 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 PLK3Q9H4B4 646 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 WNT16Q9UBV4 365 aa17.48■□□□□ 0.39
RUNX3-202ENST00000338888 TRBV11-1A0A0K0K1C0 115 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 MAP1LC3B2A6NCE7 125 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 LRRC3CA6NJW4 275 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 MDH2P40926 338 aaKnown RBP17.47■□□□□ 0.39
RUNX3-202ENST00000338888 PTGDSP41222 190 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 RPL29P47914 159 aaKnown RBP17.47■□□□□ 0.39
RUNX3-202ENST00000338888 FAM3BP58499 235 aaPredicted RBP17.47■□□□□ 0.39
RUNX3-202ENST00000338888 MAP1LC3BQ9GZQ8 125 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
RUNX3-202ENST00000338888 FKBP11Q9NYL4 201 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 ASXL3Q9C0F0 2248 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 SLC22A20A6NK97 555 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 LCATP04180 440 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 ARL16Q0P5N6 197 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 BTNL3Q6UXE8 466 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 TMEM208Q9BTX3 173 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 GPR27Q9NS67 375 aa17.47■□□□□ 0.39
RUNX3-202ENST00000338888 A0A1B0GX78 115 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 A6NNC1 897 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 DHHO43323 396 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 METTL15P1P0C7V9 234 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 RAB4AP20338 218 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 MSX1P28360 303 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 HIST1H3AP68431 136 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 HNF4GQ14541 408 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 DEFB119Q8N690 84 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 R3HDM4Q96D70 268 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 PHF7Q9BWX1 381 aaPredicted RBP17.46■□□□□ 0.39
RUNX3-202ENST00000338888 CHRNA10Q9GZZ6 450 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 POLR3KQ9Y2Y1 108 aaPredicted RBP17.46■□□□□ 0.39
RUNX3-202ENST00000338888 IFNA1P01562 189 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 CCKARP32238 428 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 RBM11P57052 281 aaKnown RBP17.46■□□□□ 0.39
RUNX3-202ENST00000338888 C1orf194Q5T5A4 169 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 GPR146Q96CH1 333 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 GOLT1BQ9Y3E0 138 aa17.46■□□□□ 0.39
RUNX3-202ENST00000338888 LAMA1P25391 3075 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 DUXBA0A1W2PPF3 345 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 HMGB3O15347 200 aaKnown RBP17.45■□□□□ 0.38
RUNX3-202ENST00000338888 IAPPP10997 89 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 OR1D5P58170 312 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 TESK1Q15569 626 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 ACTL10Q5JWF8 245 aa17.45■□□□□ 0.38
RUNX3-202ENST00000338888 C10orf128Q5T292 105 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms