RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 TNFRSF1AP19438 455 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 AGAP20933 346 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 ZBTB25P24278 435 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 FPR2P25090 351 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 MDH2P40926 338 aaKnown RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 HLA-DRB3P79483 266 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 SLC9A3R2Q15599 337 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 GRK1Q15835 563 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 SHEQ5VZ18 495 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 Q6ZS49 121 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 LDLRAD3Q86YD5 345 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 FAM216BQ8N7L0 139 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 OR11L1Q8NGX0 322 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 Q8TCH9 128 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 MRGPRDQ8TDS7 321 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 ZNF431Q8TF32 576 aaPredicted RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 CASTOR1Q8WTX7 329 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 FAM222BQ8WU58 562 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 IL1F10Q8WWZ1 152 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 CCL17Q92583 94 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 MED30Q96HR3 178 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 DIRC2Q96SL1 478 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 CCL13Q99616 98 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 VRK1Q99986 396 aaPredicted RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 CHIAQ9BZP6 476 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 PARP12Q9H0J9 701 aaKnown RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 RIMS4Q9H426 269 aaPredicted RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 GPN1Q9HCN4 374 aaPredicted RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 MYOZ1Q9NP98 299 aaPredicted RBP3.46□□□□□ -1.86
MCF2-201ENST00000338585 DECR2Q9NUI1 292 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 MGAT4CQ9UBM8 478 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 GLS2Q9UI32 602 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 NPTNQ9Y639 398 aa3.46□□□□□ -1.86
MCF2-201ENST00000338585 HRNRQ86YZ3 2850 aaPredicted RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 IGKV1D-13A0A0B4J2D9 117 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 KIR2DS1A0A191URI9 304 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TMEM30CPA0ZSE6 113 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 C9orf170A2RU37 121 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 C12orf77C9JDV5 145 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 IFNL4K9M1U5 179 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 PPYP01298 95 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SOD3P08294 240 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 ZNF728P0DKX0 622 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 IGKV1-13P0DP09 117 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 GLP1RP43220 463 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 KIR2DS4P43632 304 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SUPT4H1P63272 117 aaKnown RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 KIR2DS1Q14954 304 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TESK1Q15569 626 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SRSF7Q16629 238 aaKnown RBP eCLIP3.45□□□□□ -1.86
MCF2-201ENST00000338585 PHLDA2Q53GA4 152 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 Q5BKY6 102 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 KRBOX4Q5JUW0 171 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 FAM209AQ5JX71 171 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 DCAF12L2Q5VW00 463 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 STUMQ69YW2 141 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 LYG2Q86SG7 212 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 OR2AK2Q8NG84 335 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 OR13A1Q8NGR1 328 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 OR1L1Q8NH94 360 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 USP9XQ93008 2570 aaPredicted RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 GAFA1Q96PS6 74 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 GPHA2Q96T91 129 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SPOCK3Q9BQ16 436 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 EGLN1Q9GZT9 426 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 MS4A5Q9H3V2 200 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TAF9BQ9HBM6 251 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 MBNL3Q9NUK0 354 aaKnown RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 TRBV6-7A0A0A0MS04 114 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 OOEPA6NGQ2 149 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TMEM178BH3BS89 294 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 CCSO14618 274 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 GOSR2O14653 212 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 FCN3O75636 299 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 CD8AP01732 235 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TK1P04183 234 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 IRF2P14316 349 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 RPS2P15880 293 aaKnown RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 IGFBP2P18065 325 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SSTR5P35346 364 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 EDDM3BP56851 147 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 H2BFSP57053 126 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SNRPD2P62316 118 aaKnown RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 IL13RA1P78552 427 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SURF2Q15527 256 aaPredicted RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 HMGN3Q15651 99 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 ANKRD55Q3KP44 614 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 ZFP69Q49AA0 526 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TEX36Q5VZQ5 186 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SLC35E4Q6ICL7 350 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 CLEC18BQ6UXF7 455 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 NLRC3Q7RTR2 1065 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 TCTE3Q8IZS6 198 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 C12orf45Q8N5I9 185 aaPredicted RBP3.45□□□□□ -1.86
MCF2-201ENST00000338585 TMEM185AQ8NFB2 350 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 OR4A4PQ8NGN8 299 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 RFESDQ8TAC1 157 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 SECTM1Q8WVN6 248 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 ERGIC1Q969X5 290 aa3.45□□□□□ -1.86
MCF2-201ENST00000338585 MOB3AQ96BX8 217 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms