RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 COX6B1P14854 86 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DAOP14920 347 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 FCGR2CP31995 323 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 IL13RA1P78552 427 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR4A4PQ8NGN8 299 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIRREL1Q96J84 757 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMEM246Q9BRR3 403 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TAF9BQ9HBM6 251 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 USF3Q68DE3 2245 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 A0A0A6YYJ9 748 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 VSIG10L2P0DP72 767 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GLP1RP43220 463 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 EDDM3BP56851 147 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PAX5Q02548 391 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 HMGN3Q15651 99 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LYPD2Q6UXB3 125 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 FGFRL1Q8N441 504 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZDHHC22Q8N966 263 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MRGPRDQ8TDS7 321 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 IL1F10Q8WWZ1 152 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DCTN5Q9BTE1 182 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DNTTIP1Q9H147 329 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DSCAML1Q8TD84 2053 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ODAMA1E959 279 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ADAM20O43506 726 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NDUFS7O75251 213 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CTXN2P0C2S0 81 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 MECP2P51608 486 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 BAMBIQ13145 260 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 MED30Q96HR3 178 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SEC22CQ9BRL7 303 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FAM234AQ9H0X4 552 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GPR132Q9UNW8 380 aa12.27□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C12orf77C9JDV5 145 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 P2RX3P56373 397 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FXYD4P59646 89 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 KCNJ8Q15842 424 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CAPSLQ8WWF8 208 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GHITMQ9H3K2 345 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PCDHB10Q9UN67 800 aa12.26□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C7orf66A4D0T2 115 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CEACAM18A8MTB9 384 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PRAF2O60831 178 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IGHV2-70P01814 119 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PGAM2P15259 253 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NDUFB7P17568 137 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PI3P19957 117 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 AADACP22760 399 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FPR2P25090 351 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 MRPS11P82912 194 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 AVPI1Q5T686 147 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GLDNQ6ZMI3 551 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ADAD2Q8NCV1 583 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TOMM40LQ969M1 308 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TRBV6-7A0A0A0MS04 114 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OVOL3O00110 214 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NDUFA2O43678 99 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FCN3O75636 299 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PPYP01298 95 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IL5P05113 134 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ERP29P30040 261 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SSTR5P35346 364 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 METTL11BQ5VVY1 283 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 LURAP1Q96LR2 239 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SCGB3A2Q96PL1 93 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR1A1Q9P1Q5 309 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CTSZQ9UBR2 303 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF221Q9UK13 617 aa12.25□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PPIHO43447 177 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 HBZP02008 142 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 AKR1C4P17516 323 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 COL8A1P27658 744 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 HERV-K104P61576 105 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C4orf46Q504U0 113 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SLC25A42Q86VD7 318 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF565Q8N9K5 539 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 RFESDQ8TAC1 157 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ARL11Q969Q4 196 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms