RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZNF17P17021 662 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 TBPP20226 339 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CHATP28329 748 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 HGFACQ04756 655 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 ZP4Q12836 540 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 RNF212Q495C1 297 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 FDX2Q6P4F2 183 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 RBMS3Q6XE24 437 aaKnown RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 UBAC2Q8NBM4 344 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CPEB3Q8NE35 698 aaKnown RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 SLC39A9Q9NUM3 307 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 PLXNB1O43157 2135 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 PTPRQQ9UMZ3 2332 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 MPPED1O15442 326 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 PSG2P11465 335 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 CD46P15529 392 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 NTF4P34130 210 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 LSM6P62312 80 aaKnown RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 NKX6-1P78426 367 aaPredicted RBP7.11□□□□□ -1.27
HPS4-201ENST00000336873 PMS2CLQ68D20 193 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 ZNF343Q6P1L6 599 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 SPSB1Q96BD6 273 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 NIPSNAP3BQ9BS92 247 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 MMP26Q9NRE1 261 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 HSF4Q9ULV5 492 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
HPS4-201ENST00000336873 IGKV1-27A0A075B6S5 117 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FIGNL2A6NMB9 653 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 A8MXK9 166 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SPINK4O60575 86 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 YIF1AO95070 293 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 ATP6V0CP27449 155 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 GCH1P30793 250 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FAM27BQ5VT28 67 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 RHOVQ96L33 236 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 NMES1Q9C002 83 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SLC25A22Q9H936 323 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 TECTAO75443 2155 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 H0YL77 283 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 KLF7O75840 302 aaPredicted RBP7.1□□□□□ -1.27
HPS4-201ENST00000336873 MELTFP08582 738 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SRD5A2P31213 254 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 OR3A1P47881 315 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 MEOX1P50221 254 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 LINC00205P59089 165 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 RAB4BP61018 213 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FAM3AP98173 230 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 AESQ08117 197 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FAM166AQ6J272 317 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 ZNF880Q6PDB4 577 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 ZNF441Q8N8Z8 693 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 OR4A4PQ8NGN8 299 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 TVP23CQ96ET8 276 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 UCK1Q9HA47 277 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 FOXJ2Q9P0K8 574 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 GPR137BO60478 399 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SERPINA7P05543 415 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SMIM6P0DI80 62 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SELLP14151 372 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 TMEM11P17152 192 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 ZNF266Q14584 549 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 OR8G1Q15617 311 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 NUFIP2Q7Z417 695 aaKnown RBP7.1□□□□□ -1.27
HPS4-201ENST00000336873 SLC25A31Q9H0C2 315 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 OR1A1Q9P1Q5 309 aa7.1□□□□□ -1.27
HPS4-201ENST00000336873 SPAARA0A1B0GVQ0 90 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 BTBD17A6NE02 478 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 SLC22A20A6NK97 555 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 DNASE2O00115 360 aaPredicted RBP7.09□□□□□ -1.27
HPS4-201ENST00000336873 LILRA1O75019 489 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 IGLV3-19P01714 112 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 HEXAP06865 529 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PRB4P10163 310 aaPredicted RBP7.09□□□□□ -1.27
HPS4-201ENST00000336873 EGR1P18146 543 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 EWSR1Q01844 656 aaKnown RBP eCLIP7.09□□□□□ -1.27
HPS4-201ENST00000336873 FAM53AQ6NSI3 398 aaPredicted RBP7.09□□□□□ -1.27
HPS4-201ENST00000336873 LIAT1Q6ZQX7 453 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 ZNF818PQ6ZRF7 136 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 LHX4Q969G2 390 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 WNT5BQ9H1J7 359 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PSENENQ9NZ42 101 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 GHRLQ9UBU3 117 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PILRBQ9UKJ0 227 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 A0A1W2PPQ1 181 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 K7ESF4 209 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PTGDSP41222 190 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 SOX8P57073 446 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 ZNF239Q16600 458 aaKnown RBP7.09□□□□□ -1.27
HPS4-201ENST00000336873 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 DEFB109BQ30KR1 87 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 ZNF528Q3MIS6 628 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 PRAMEF6Q5VXH4 476 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 FAM58AQ8N1B3 248 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
HPS4-201ENST00000336873 ABHD14BQ96IU4 210 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms