RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 MCHR1Q99705 422 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 EFCAB11Q9BUY7 163 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 VN1R1Q9GZP7 353 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 NKX2-4Q9H2Z4 354 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 TP53TG3Q9ULZ0 132 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 IER3IP1Q9Y5U9 82 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 ANK1P16157 1881 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 GYPBP06028 91 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 SLC6A6P31641 620 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 HLA-DRB5Q30154 266 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 FAM166AQ6J272 317 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 LINC01555Q8NAE3 123 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 VSTM2AQ8TAG5 236 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 PLEKHF2Q9H8W4 249 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 RARRES3Q9UL19 164 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 B3GALT5Q9Y2C3 310 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 LRRC3CA6NJW4 275 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 M0QXV9 152 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 CGAP01215 116 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 CEACAM5P06731 702 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 EWSR1Q01844 656 aaKnown RBP eCLIP7.45□□□□□ -1.22
TDP1-201ENST00000335725 CD226Q15762 336 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 ACSF3Q4G176 576 aaPredicted RBP7.45□□□□□ -1.22
TDP1-201ENST00000335725 ZNF684Q5T5D7 378 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 SPATA31B1PQ5VZV4 182 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 Q6ZSR6 202 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
TDP1-201ENST00000335725 TMEM255BQ8WV15 326 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
TDP1-201ENST00000335725 ULBP2Q9BZM5 246 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 PRR13Q9NZ81 148 aa7.45□□□□□ -1.22
TDP1-201ENST00000335725 TNFSF12O43508 249 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 CELA3AP09093 270 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 ZNF728P0DKX0 622 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 USF1P22415 310 aaPredicted RBP7.44□□□□□ -1.22
TDP1-201ENST00000335725 LMO2P25791 158 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 GPER1Q99527 375 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 SMCHD1A6NHR9 2005 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 H2BFMP0C1H6 154 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 IGLL1P15814 213 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 LINC00310P59036 64 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 PCK2Q16822 640 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 ABHD17BQ5VST6 288 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 TMEM42Q69YG0 159 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 GVQW1Q8N7I0 195 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 DOK4Q8TEW6 326 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 UBR3Q6ZT12 1888 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 TRBV9A0A0B4J1U6 114 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 H0YJW9 148 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 MLNRO43193 412 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 ETHE1O95571 254 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 EPPINO95925 133 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 GYPAP02724 150 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 PNPLA4P41247 253 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 MRPL30Q8TCC3 161 aaKnown RBP7.44□□□□□ -1.22
TDP1-201ENST00000335725 MRPL24Q96A35 216 aaKnown RBP7.44□□□□□ -1.22
TDP1-201ENST00000335725 Q96M85 177 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 BPIFA1Q9NP55 256 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 SERTAD4Q9NUC0 356 aa7.44□□□□□ -1.22
TDP1-201ENST00000335725 DCDC2BA2VCK2 349 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 GRXCR1A8MXD5 290 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 H3BMH7 237 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 ZNF324O75467 553 aaPredicted RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 SERPINE2P07093 398 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 SELPP16109 830 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PMCHP20382 165 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 GATA3P23771 443 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 NPY1RP25929 384 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PGFP49763 221 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 CDC42EP5Q6NZY7 148 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PRRT2Q7Z6L0 340 aaPredicted RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 OR4N5Q8IXE1 308 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PERPQ96FX8 193 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PMCHL2Q9BQD1 86 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 TM2D1Q9BX74 207 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 PLPP3O14495 311 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 TNFRSF13BO14836 293 aaPredicted RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 UTS2O95399 124 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 TGFBR3Q03167 851 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 OR2C3Q8N628 320 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 CHRNA10Q9GZZ6 450 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 KCNK15Q9H427 330 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 IL36GQ9NZH8 169 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 NKX2-8O15522 239 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 JMJD7P0C870 316 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 FABP2P12104 132 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 MRPS34P82930 218 aaKnown RBP7.43□□□□□ -1.22
TDP1-201ENST00000335725 AGERQ15109 404 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 GLYATL3Q5SZD4 288 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
TDP1-201ENST00000335725 WDR61Q9GZS3 305 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms