RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 DDA1Q9BW61 102 aa10.02□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 KLF13Q9Y2Y9 288 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR2W1Q9Y3N9 320 aa10.02□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 PGLYRP1O75594 196 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HBE1P02100 147 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ARG1P05089 322 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 MPLP40238 635 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 MEOX2P50222 304 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 SLC10A1Q14973 349 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 Q8NFD4 153 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR5D13Q8NGL4 314 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ARRDC1-AS1Q9H2J1 176 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 K7N7A8 449 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 CBR1P16152 277 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR2B8PP59922 312 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ZNF154Q13106 437 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FRYLO94915 3013 aa10.01□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 LRP5LA4QPB2 252 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR2C1O95371 312 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 MMP9P14780 707 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RNF212Q495C1 297 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HIKESHIQ53FT3 197 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 SHEQ5VZ18 495 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 Q6ZPA2 131 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 POM121L2Q96KW2 1035 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 KLF2Q9Y5W3 355 aaPredicted RBP10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 C21orf140B9A014 251 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FAM157AC9JC47 383 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 CD46P15529 392 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 UBE2KP61086 200 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 IL24Q13007 206 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 VASH2Q86V25 355 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR5P3Q8WZ94 311 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RARRES2Q99969 163 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RTL8AQ9BWD3 113 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FREM1Q5H8C1 2179 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 IFNA17P01571 189 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TDGF1P13385 188 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RAB5AP20339 215 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 PAX6P26367 422 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 MEOX1P50221 254 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 UBE2NP61088 152 aaKnown RBP10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HLA-DRB3P79483 266 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RUNX1Q01196 453 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HERPUD1Q15011 391 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 THNSL2Q86YJ6 484 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 IL22RA2Q969J5 263 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ESRP2Q9H6T0 727 aaKnown RBP10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 CDH20Q9HBT6 801 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 GPR179Q6PRD1 2367 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ZNF407Q9C0G0 2248 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 NCOR1O75376 2440 aa10□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 hCG_1809904A0A1W2PP81 198 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 A0A1W2PPE2 198 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 A0A1W2PR64 198 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 A0A1W2PRV1 198 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 C9orf172C9J069 976 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 PROB1E7EW31 1015 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 SIRPB1O00241 398 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ZXDAP98168 799 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TGIF1Q15583 401 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TBC1D28Q2M2D7 210 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FER1L6-AS2Q96M78 137 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RAB40CQ96S21 281 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ATP5SQ99766 215 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TUBA4BQ9H853 241 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FOXJ2Q9P0K8 574 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 WDR1O75083 606 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TUSC2O75896 110 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 NXPH2O95156 264 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FOLR2P14207 255 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 ID3Q02535 119 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TGFBR3Q03167 851 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 OR8G1Q15617 311 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 NUFIP2Q7Z417 695 aaKnown RBP9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 LILRB2Q8N423 598 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 CRIM1Q9NZV1 1036 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 POLDIP2Q9Y2S7 368 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 A0A1B0GU03 582 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 S100A8P05109 93 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 PSG2P11465 335 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 FIP1L1Q6UN15 594 aaKnown RBP9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 MRPL30Q8TCC3 161 aaKnown RBP9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 TMEM171Q8WVE6 324 aa9.99□□□□□ -0.81
CSPG4P4Y-201ENST00000333235 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms