RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CBLN4Q9NTU7 201 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 SEC16AO15027 2179 aa15.58■□□□□ 0.08
CLSTN3-202ENST00000331148 CLEC18AA5D8T8 446 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 CHST1O43916 411 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 OR2J2O76002 312 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 NR2C1P13056 603 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 GNRHRP30968 328 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF41P51814 821 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 TDGF1P3P51864 188 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 RSPO1Q2MKA7 263 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 NMSQ5H8A3 153 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 TEX38Q6PEX7 206 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF66Q6ZN08 573 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 NECAP1Q8NC96 275 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 CLEC18CQ8NCF0 446 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 OR2V1Q8NHB1 315 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF25P17030 456 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 FGF8P55075 233 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 PAX9P55771 341 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 PMS2P11Q13670 270 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 ADIRFQ15847 76 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF726P1Q15940 193 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 SLC25A24Q6NUK1 477 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 MRGPRX4Q96LA9 322 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 RARRES3Q9UL19 164 aa15.57■□□□□ 0.08
CLSTN3-202ENST00000331148 IGHV3-20A0A0C4DH32 117 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 MARCH11A6NNE9 402 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 IFNA5P01569 189 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 HLA-HP01893 362 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 GZMHP20718 246 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 MSR1P21757 451 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 ERVS71-1P61550 626 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 ENDOGQ14249 297 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 IQCJQ1A5X6 159 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 PLPPR5Q32ZL2 321 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 NCR3LG1Q68D85 454 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 SSX7Q7RTT5 188 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 GJC3Q8NFK1 279 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 THAP3Q8WTV1 239 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM170AQ8WVE7 144 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM18Q96B42 140 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 OXGR1Q96P68 337 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 VSIRQ9H7M9 311 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 CEBPZOSA8MTT3 80 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 PPP5D1E7EU14 171 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 M0R135 149 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 SOX15O60248 233 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 MBP02144 154 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 OR8B8Q15620 311 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 SNAI3Q3KNW1 292 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 SPIN3Q5JUX0 258 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 MBD3L1Q8WWY6 194 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF799Q96GE5 643 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 LOXL4Q96JB6 756 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 RSG1Q9BU20 258 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 NAT8Q9UHE5 227 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 RNF115Q9Y4L5 304 aa15.56■□□□□ 0.08
CLSTN3-202ENST00000331148 FGF5P12034 268 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 ERVFC1-1P60608 527 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 MRPS34P82930 218 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 MRPL41Q8IXM3 137 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 IGKV1-12A0A0C4DH73 117 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 DUXBA0A1W2PPF3 345 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 SCRG1O75711 98 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 IGKV1D-12P01611 117 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 MMP7P09237 267 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 CCKARP32238 428 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 OTX1P32242 354 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 NPBWR2P48146 333 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 SLC25A53Q5H9E4 307 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 OSR2Q8N2R0 312 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 OR51G1Q8NGK1 321 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 SMIM7Q9BQ49 75 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 Q9N2K0 584 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 SLC7A10Q9NS82 523 aa15.55■□□□□ 0.08
CLSTN3-202ENST00000331148 MYO7BQ6PIF6 2116 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 NTN3O00634 580 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 PDCD6O75340 191 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 TIAF1O95411 115 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 VDAC1P21796 283 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 GALR1P47211 349 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 FOXL2P58012 376 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 FAM3BP58499 235 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM267Q0VDI3 215 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 PDCD1Q15116 288 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 ASCL4Q6XD76 172 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 SHISA6Q6ZSJ9 500 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 CYP2G1PQ6ZSU1 146 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 GPHA2Q96T91 129 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 AGMATQ9BSE5 352 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 KLRF1Q9NZS2 232 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 B4E171 279 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 H3BP45 60 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF883P0CG24 379 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 TSPAN7P41732 249 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 GUCA1AP43080 201 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 IDH3GP51553 393 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 CLDN17P56750 224 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 CNN3Q15417 329 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 ACTL10Q5JWF8 245 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms