RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 FAM71E2Q8N5Q1 922 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 NRG4Q8WWG1 115 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 GHSRQ92847 366 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 TMEM106AQ96A25 262 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 RFT1Q96AA3 541 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 SNX22Q96L94 193 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 S100A13Q99584 98 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 MND1Q9BWT6 205 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 TMEM138Q9NPI0 162 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 PCDHB16Q9NRJ7 776 aa11.49□□□□□ -0.57
CTHRC1-201ENST00000330295 FUOMA2VDF0 154 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 K7N7A8 449 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 ZNF728P0DKX0 622 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 BCL3P20749 454 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 HTR1DP28221 377 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 RIPK1Q13546 671 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 ZNF146Q15072 292 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 DMKNQ6E0U4 476 aaPredicted RBP11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 IZUMO2Q6UXV1 221 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 LYPD6Q86Y78 171 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 Q8N1Y9 231 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 OR11H1Q8NG94 326 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 OR5D18Q8NGL1 313 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 SPACA5Q96QH8 159 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 HMG20AQ9NP66 347 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 EXOSC4Q9NPD3 245 aaKnown RBP11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 RBFOX1Q9NWB1 397 aaKnown RBP11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 PAK1IP1Q9NWT1 392 aaPredicted RBP11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 MOB4Q9Y3A3 225 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 KIAA2026Q5HYC2 2103 aa11.48□□□□□ -0.57
CTHRC1-201ENST00000330295 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 hADV38S2A0JD32 116 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 SAP30O75446 220 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 KDM4BO94953 1096 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 CDK1P06493 297 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 CELP19835 753 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 NPBWR2P48146 333 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 ARHGDIBP52566 201 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 EDDM3BP56851 147 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 BDH1Q02338 343 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 RSU1Q15404 277 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 Q499Y3 187 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 CXorf66Q5JRM2 361 aaPredicted RBP11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 RNLSQ5VYX0 342 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 XAF1Q6GPH4 301 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 OR8H2Q8N162 312 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 STPG2Q8N412 459 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 NANOGP1Q8N7R0 232 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 ST6GALNAC5Q9BVH7 336 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 ANKRD60Q9BZ19 345 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 Q9H521 79 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 TAS2R4Q9NYW5 299 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 BLOC1S6Q9UL45 172 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
CTHRC1-201ENST00000330295 F8VVB4 439 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 F8VWA3 439 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 CD1AP06126 327 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 BDKRB2P30411 391 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 GRK1Q15835 563 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 PXT1Q8NFP0 134 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 OR4P4Q8NGL7 312 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 OR6Q1Q8NGQ2 317 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 FAM192AQ9GZU8 254 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 RETNQ9HD89 108 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 KIAA1456Q9P272 454 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 DSCAML1Q8TD84 2053 aa11.46□□□□□ -0.57
CTHRC1-201ENST00000330295 TRBV5-5A0A0J9YX44 114 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 PNMA8CA0A1B0GUJ8 204 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 MEX3AA1L020 520 aaKnown RBP11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 MGST3O14880 152 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 DEGS1O15121 323 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 RGS10O43665 173 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 ATP6V1G2O95670 118 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 CSTBP04080 98 aaKnown RBP11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 OR8U8P0C7N1 319 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF44P15621 663 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 FSTP19883 344 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 DUSP1P28562 367 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF93P35789 620 aaPredicted RBP11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 VHLP40337 213 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 SNU13P55769 128 aaKnown RBP11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 SCN1BQ07699 218 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 EDDM3AQ14507 147 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 SPHARQ15513 63 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 PNLIPRP3Q17RR3 467 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 DDI2Q5TDH0 399 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 ZNF529Q6P280 563 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 FOXRED2Q8IWF2 684 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 MS4A15Q8N5U1 240 aa11.45□□□□□ -0.58
CTHRC1-201ENST00000330295 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms