RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SLC36A1Q7Z2H8 476 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 PTX4Q96A99 478 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 PROK2Q9HC23 129 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 OR1A1Q9P1Q5 309 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 TIMM8BQ9Y5J9 83 aaPredicted RBP13.77□□□□□ -0.21
SYNM-201ENST00000328642 MALRD1Q5VYJ5 2156 aa13.77□□□□□ -0.21
SYNM-201ENST00000328642 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 HMSDA8MTL9 139 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 ZNF708P17019 499 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 RPS10P46783 165 aaKnown RBP13.76□□□□□ -0.21
SYNM-201ENST00000328642 H3F3AP84243 136 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 KLF14Q8TD94 323 aaPredicted RBP13.76□□□□□ -0.21
SYNM-201ENST00000328642 MRPS24Q96EL2 167 aaKnown RBP13.76□□□□□ -0.21
SYNM-201ENST00000328642 RHOFQ9HBH0 211 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 NGBQ9NPG2 151 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 SPRR3Q9UBC9 169 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 AQP7O14520 342 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 CD37P11049 281 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 HBG1P69891 147 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 HBG2P69892 147 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 ZNF154Q13106 437 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 TUSC1Q2TAM9 212 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 NSUN5P2Q63ZY6 315 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 TECTBQ96PL2 329 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 PIGMQ9H3S5 423 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 RIMS4Q9H426 269 aaPredicted RBP13.76□□□□□ -0.21
SYNM-201ENST00000328642 RPH3ALQ9UNE2 315 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 hCG_38984A0A1B0GV85 526 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 TRDCB7Z8K6 153 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 H7C1Q1 480 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 LILRA1O75019 489 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 DAOP14920 347 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 HNF1AP20823 631 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 ALDH3B1P43353 468 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 RUNX1Q01196 453 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 SMUG1Q53HV7 270 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 ZNF660Q6AZW8 331 aaPredicted RBP13.76□□□□□ -0.21
SYNM-201ENST00000328642 LIAT1Q6ZQX7 453 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 OR2C3Q8N628 320 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 NABP1Q96AH0 204 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 GPR137Q96N19 417 aa13.76□□□□□ -0.21
SYNM-201ENST00000328642 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 IGKV1-12A0A0C4DH73 117 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 IGKV1D-12P01611 117 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 CYC1P08574 325 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 FGF8P55075 233 aaPredicted RBP13.75□□□□□ -0.21
SYNM-201ENST00000328642 UBE2KP61086 200 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 C9orf106Q8NAJ2 232 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 PLEKHA3Q9HB20 300 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 MTCH1Q9NZJ7 389 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 OR2H2O95918 312 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
SYNM-201ENST00000328642 CHATP28329 748 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 OR2B8PP59922 312 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 SSTP61278 116 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 HES1Q14469 280 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 IGLV3-32A0A0A0MS00 114 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 F2RL1P55085 397 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 OVCH2Q7RTZ1 564 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 OR1L1Q8NH94 360 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 C14orf79Q96F83 325 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 KIAA1549LQ6ZVL6 1849 aa13.75□□□□□ -0.21
SYNM-201ENST00000328642 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 RPL36A-HNRNPH2H7BZ11 118 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 ABCD4O14678 606 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 SNAPINO95295 136 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 NMBP08949 121 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 OR52M1Q8NGK5 317 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 DLL3Q9NYJ7 618 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 YLPM1P49750 1951 aaKnown RBP13.74□□□□□ -0.21
SYNM-201ENST00000328642 REG1BP48304 166 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 EGLN1Q9GZT9 426 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 PARD6AQ9NPB6 346 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 G6PCP35575 357 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 GNB1P62873 340 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 PRB3Q04118 309 aaPredicted RBP13.74□□□□□ -0.21
SYNM-201ENST00000328642 PIK3IP1Q96FE7 263 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 PLEKHA2Q9HB19 425 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 TNFSF18Q9UNG2 199 aa13.74□□□□□ -0.21
SYNM-201ENST00000328642 IGKV1-27A0A075B6S5 117 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 UBE2G2P60604 165 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 FGF12P61328 243 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 NKX6-2Q9C056 277 aaPredicted RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 NAT2P11245 290 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 RND1Q92730 232 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 WDYHV1Q96HA8 205 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 OR2V2Q96R30 315 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 ZNF106Q9H2Y7 1883 aaKnown RBP13.73□□□□□ -0.21
SYNM-201ENST00000328642 S100A2P29034 98 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 FHITP49789 147 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 RHEBQ15382 184 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 OR10X1Q8NGY0 326 aa13.73□□□□□ -0.21
SYNM-201ENST00000328642 RPUSD4Q96CM3 377 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms