RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 RNF115Q9Y4L5 304 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF708P17019 499 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 F2RP25116 425 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 ASCL1P50553 236 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 HPRT1P00492 218 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 RAB32Q13637 225 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 TIMM23BQ5SRD1 257 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 CDCP2Q5VXM1 449 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 ACSM6Q6P461 480 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 SIGLECL1Q8N7X8 197 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 GPR137Q96N19 417 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 TOLLIPQ9H0E2 274 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 COX7A1P24310 79 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 NCR3LG1Q68D85 454 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 SF3B6Q9Y3B4 125 aaKnown RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 RAB29O14966 203 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 PGLYRP3Q96LB9 341 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 TRAF4Q9BUZ4 470 aaPredicted RBP9.91□□□□□ -0.82
COL4A5-201ENST00000328300 SLC2A9Q9NRM0 540 aa9.91□□□□□ -0.82
COL4A5-201ENST00000328300 DEFB108AA8MXU0 73 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 SYNGR1O43759 233 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 TIAF1O95411 115 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 IL11P20809 199 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF714Q96N38 554 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
COL4A5-201ENST00000328300 PDCD11Q14690 1871 aaKnown RBP9.9□□□□□ -0.82
COL4A5-201ENST00000328300 B9A039 149 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 FCGR3AP08637 254 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 SLC25A4P12235 298 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 PTHLHP12272 177 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF345Q14585 488 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 SP6Q3SY56 376 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 TIMP4Q99727 224 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 TRAV20A0A0B4J274 112 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 CHEK1O14757 476 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 FFAR4Q5NUL3 377 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 CLEC2AQ6UVW9 174 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 OR5C1Q8NGR4 320 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 OR10AC1Q8NH08 325 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 SRXN1Q9BYN0 137 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 PHOX2AO14813 284 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 NTF3P20783 257 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 VAMP3Q15836 100 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 TMEM65Q6PI78 240 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 GAPTQ8N292 157 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 OR52L2PQ8NGH6 319 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 MIOXQ9UGB7 285 aa9.9□□□□□ -0.82
COL4A5-201ENST00000328300 ZNF646O15015 1829 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-201ENST00000328300 K7N7A8 449 aa9.9□□□□□ -0.83
COL4A5-201ENST00000328300 SULT1A1P50225 295 aa9.9□□□□□ -0.83
COL4A5-201ENST00000328300 SUMO1P63165 101 aaKnown RBP9.9□□□□□ -0.83
COL4A5-201ENST00000328300 HLXQ14774 488 aaPredicted RBP9.9□□□□□ -0.83
COL4A5-201ENST00000328300 LINC01590Q5TEZ4 76 aa9.9□□□□□ -0.83
COL4A5-201ENST00000328300 ZCCHC14Q8WYQ9 949 aaKnown RBP9.9□□□□□ -0.83
COL4A5-201ENST00000328300 SEMA5BQ9P283 1151 aa9.9□□□□□ -0.83
COL4A5-201ENST00000328300 G3V3Q6 166 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 J3QR89 54 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 DVL1O14640 695 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 DVL1P1P54792 670 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 PDCD1Q15116 288 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 COX19Q49B96 90 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 OR1L8Q8NGR8 309 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 FAM57AQ8TBR7 257 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 DTD1Q8TEA8 209 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 CBY3A6NI87 242 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF785A8K8V0 405 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 COL10A1Q03692 680 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 RSPO4Q2I0M5 234 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 GVQW1Q8N7I0 195 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 PRR19A6NJB7 356 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 RBP4P02753 201 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.834e-6■□□□□ 11.2
COL4A5-201ENST00000328300 OR5B3Q8NH48 314 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 WNT5BQ9H1J7 359 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 G6PC2Q9NQR9 355 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 ZNF835Q9Y2P0 537 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 IGHV3-43A0A0B4J1X8 118 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 OR5H1A6NKK0 313 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 H0Y980 276 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 CST7O76096 145 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 IGHV3-43DP0DP04 118 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 HLA-GP17693 338 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 CDC34P49427 236 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 ATP5IP56385 69 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 PMP22Q01453 160 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 ZNRF4Q8WWF5 429 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 IL22RA2Q969J5 263 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 TMPRSS13Q9BYE2 586 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 INSIG2Q9Y5U4 225 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 CORTO00230 105 aa9.89□□□□□ -0.83
COL4A5-201ENST00000328300 RPL31P62899 125 aaKnown RBP9.89□□□□□ -0.83
COL4A5-201ENST00000328300 EGR4Q05215 589 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms