RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 RSBN1Q5VWQ0 802 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-201ENST00000327154 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 PLPPR1Q8TBJ4 325 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 MRGPRDQ8TDS7 321 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 TOMM40LQ969M1 308 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 TMEM106AQ96A25 262 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 PHF21AQ96BD5 680 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 PGLYRP3Q96LB9 341 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 PSG11Q9UQ72 335 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 ST3GAL6Q9Y274 331 aa11.24□□□□□ -0.61
RPAIN-201ENST00000327154 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
RPAIN-201ENST00000327154 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-201ENST00000327154 NPIPB11E5RHQ5 1161 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 M0QZK8 103 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 PIN1P1O15428 100 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 IL1AP01583 271 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
RPAIN-201ENST00000327154 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 IGLL1P15814 213 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 MAP2K4P45985 399 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 GNG10P50151 68 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 LOXL3P58215 753 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 Q499Y3 187 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 FOXB2Q5VYV0 432 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 PRSS48Q7RTY5 328 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 DRAM1Q8N682 238 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 SUMF2Q8NBJ7 301 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 OR4X2Q8NGF9 303 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 OR56B4Q8NH76 319 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 MRAPQ8TCY5 172 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 ORAI1Q96D31 301 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 OR14A2Q96R54 314 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 DPCDQ9BVM2 203 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-201ENST00000327154 METTL9Q9H1A3 318 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 TMEM138Q9NPI0 162 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 PCDHB16Q9NRJ7 776 aa11.23□□□□□ -0.61
RPAIN-201ENST00000327154 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-201ENST00000327154 TRBV5-5A0A0J9YX44 114 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 A0A1W2PPE3 182 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A18PA6NE21 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A16PA6NEW6 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A20PA6NIJ5 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A12PA8MX19 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A5PA8MXJ8 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 CSTBP04080 98 aaKnown RBP11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A15PP0C7V4 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A13PP0C7W8 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A14PP0C7W9 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 FAM90A24PP0C7X0 464 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 SSTR5P35346 364 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 ZNF93P35789 620 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-201ENST00000327154 KCNJ3P48549 501 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 RPS11P62280 158 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPAIN-201ENST00000327154 PPP3R1P63098 170 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 PAX5Q02548 391 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 HES1Q14469 280 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 HNF4GQ14541 408 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 KHDC1LQ5JSQ8 128 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 DDI2Q5TDH0 399 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 OSR2Q8N2R0 312 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 TMED9Q9BVK6 235 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-201ENST00000327154 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
RPAIN-201ENST00000327154 A0A1W2PPI3 338 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
RPAIN-201ENST00000327154 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-201ENST00000327154 PF4P02776 101 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 GZMHP20718 246 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 SERPINA2P20848 420 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 BDKRB2P30411 391 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 SLC16A12Q6ZSM3 486 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 OR10A7Q8NGE5 316 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 OR10X1Q8NGY0 326 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 UFD1Q92890 307 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 S100A13Q99584 98 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 IFT22Q9H7X7 185 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 IL36GQ9NZH8 169 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 CKLFQ9UBR5 152 aa11.21□□□□□ -0.61
RPAIN-201ENST00000327154 CD1AP06126 327 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 TMEM11P17152 192 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 RAB7AP51149 207 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 RBM11P57052 281 aaKnown RBP11.2□□□□□ -0.62
RPAIN-201ENST00000327154 TBCEQ15813 527 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-201ENST00000327154 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 ATAD3CQ5T2N8 411 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 LIPKQ5VXJ0 399 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 CCDC107Q8WV48 283 aa11.2□□□□□ -0.62
RPAIN-201ENST00000327154 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
RPAIN-201ENST00000327154 TRBV5-7A0A0A0MS05 114 aa11.19□□□□□ -0.62
RPAIN-201ENST00000327154 A0A1W2PP11 408 aa11.19□□□□□ -0.62
RPAIN-201ENST00000327154 TMEM30CPA0ZSE6 113 aa11.19□□□□□ -0.62
RPAIN-201ENST00000327154 PSMB11A5LHX3 300 aa11.19□□□□□ -0.62
RPAIN-201ENST00000327154 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms