RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	NKX6-3	A6NJ46	265 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771		J3QT63	122 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	RHBDL1	O75783	438 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	NEURL1	O76050	574 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	IGHM	P01871	453 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	TFF1	P04155	84 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	PRF1	P14222	555 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	UCP2	P55851	309 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	OR2B8P	P59922	312 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	NHLH2	Q02577	135 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	TLE4	Q04727	773 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	ADIRF	Q15847	76 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	OR2C3	Q8N628	320 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	BPIFC	Q8NFQ6	507 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	OR10Z1	Q8NGY1	313 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	S1PR3	Q99500	378 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	LIN7C	Q9NUP9	197 aa	Known RBP	10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	HAND1	O96004	215 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	PMEL	P40967	661 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	GPR132	Q9UNW8	380 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	AMDHD2	Q9Y303	409 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	COL4A3	Q01955	1670 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	HMSD	A8MTL9	139 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	S100P	P25815	95 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	TAGLN2	P37802	199 aa	Known RBP	10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	UBE2G2	P60604	165 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	RIPPLY2	Q5TAB7	128 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	ZIC4	Q8N9L1	334 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	ARV1	Q9H2C2	271 aa		10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.2	□□□□□ -0.78
DDR1-223	ENST00000324771	LRRC3C	A6NJW4	275 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	TRDC	B7Z8K6	153 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	UMAD1	C9J7I0	102 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	WNT9B	O14905	357 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	SNRPE	P62304	92 aa	Known RBP	10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	MPPED2	Q15777	294 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	OR10P1	Q8NGE3	313 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	PIK3IP1	Q96FE7	263 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	SOST	Q9BQB4	213 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	ST8SIA5	O15466	376 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	P2RY4	P51582	365 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	ZNF528	Q3MIS6	628 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	HIST2H3PS2	Q5TEC6	136 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	LIAT1	Q6ZQX7	453 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	BMPER	Q8N8U9	685 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	NECAP1	Q8NC96	275 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	ABHD14B	Q96IU4	210 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	FN3KRP	Q9HA64	309 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	TMED3	Q9Y3Q3	217 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	LY6G6E	A0A0G2JKS1	128 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	DFFB	O76075	338 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	OR8U8	P0C7N1	319 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	DAO	P14920	347 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	FGF8	P55075	233 aa	Predicted RBP	10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	ZNF154	Q13106	437 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	CEACAM21	Q3KPI0	293 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	C10orf128	Q5T292	105 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	RAB9B	Q9NP90	201 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771		U3KQA8	63 aa		10.19	□□□□□ -0.78
DDR1-223	ENST00000324771	PSG2	P11465	335 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	FAM201A	Q5SY85	155 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	TMEM54	Q969K7	222 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	PTX4	Q96A99	478 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	LYZL4	Q96KX0	146 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	TMEM68	Q96MH6	324 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	ZNF355P	Q9NSJ1	428 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	NDRG3	Q9UGV2	375 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	CCDC168	Q8NDH2	2452 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	TAAR5	O14804	337 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	APELA	P0DMC3	54 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	TMEM108	Q6UXF1	575 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	NIPSNAP3B	Q9BS92	247 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	TRGV10	A0A0A0MS01	117 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	ZNF385C	Q66K41	422 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	LAMTOR1	Q6IAA8	161 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	MYPOP	Q86VE0	399 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	OR52L2P	Q8NGH6	319 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	LEAP2	Q969E1	77 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	MIOX	Q9UGB7	285 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	STRAP	Q9Y3F4	350 aa	Known RBP	10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	NPIPB13	A6NJU9	1138 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	NPIPB4	C9JG80	1138 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	SYNGR3	O43761	229 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	CNIH1	O95406	144 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	CYC1	P08574	325 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	RUNX1	Q01196	453 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	ZNF273	Q14593	569 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	PDZD11	Q5EBL8	140 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	NSUN5P2	Q63ZY6	315 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	WDFY1	Q8IWB7	410 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771		Q96M66	194 aa		10.18	□□□□□ -0.78
DDR1-223	ENST00000324771	ARFGEF3	Q5TH69	2177 aa		10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	MFNG	O00587	321 aa		10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	CST4	P01036	141 aa		10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	SNRPC	P09234	159 aa	Known RBP	10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	ZP3	P21754	424 aa		10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	HOXA6	P31267	233 aa		10.17	□□□□□ -0.78
DDR1-223	ENST00000324771	ID4	P47928	161 aa		10.17	□□□□□ -0.78

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