RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 VSIG4Q9Y279 399 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 IER3P46695 156 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 INO80CQ6PI98 192 aaPredicted RBP18.42■□□□□ 0.54
RNF40-201ENST00000324685 ZNF383Q8NA42 475 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 TRBV5-3A0A0A0MS03 114 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 PIGYQ3MUY2 71 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 ZNF880Q6PDB4 577 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 OR8I2Q8N0Y5 310 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 MRPL30Q8TCC3 161 aaKnown RBP18.42■□□□□ 0.54
RNF40-201ENST00000324685 TMEM204Q9BSN7 226 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 SMDT1Q9H4I9 107 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 INSIG2Q9Y5U4 225 aa18.42■□□□□ 0.54
RNF40-201ENST00000324685 A0A1W2PRD5 423 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 A0A1W2PRF3 423 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 A0A1W2PRM7 423 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 PSG2P11465 335 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 WDFY1Q8IWB7 410 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 RND1Q92730 232 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 CD1AP06126 327 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 SUCLG1P53597 346 aaKnown RBP18.41■□□□□ 0.54
RNF40-201ENST00000324685 GGTLC2Q14390 218 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 GBGT1Q8N5D6 347 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 PTPMT1Q8WUK0 201 aaPredicted RBP18.41■□□□□ 0.54
RNF40-201ENST00000324685 MRPS18AQ9NVS2 196 aaKnown RBP18.41■□□□□ 0.54
RNF40-201ENST00000324685 TNFSF18Q9UNG2 199 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 PLA2G10O15496 165 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 ID1P41134 155 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 RTP5Q14D33 572 aa18.41■□□□□ 0.54
RNF40-201ENST00000324685 TRAV8-7A0A075B6U6 113 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 SMAGPQ0VAQ4 97 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 GABRA6Q16445 453 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 OR2D3Q8NGH3 330 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 POM121Q96HA1 1249 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 RBM14Q96PK6 669 aaKnown RBP18.4■□□□□ 0.54
RNF40-201ENST00000324685 RCC2Q9P258 522 aaKnown RBP18.4■□□□□ 0.54
RNF40-201ENST00000324685 KLF7O75840 302 aaPredicted RBP18.4■□□□□ 0.54
RNF40-201ENST00000324685 ACAA1P09110 424 aaPredicted RBP18.4■□□□□ 0.54
RNF40-201ENST00000324685 GAB4Q2WGN9 574 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 IFITM10A6NMD0 228 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 AGFG2O95081 481 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
RNF40-201ENST00000324685 MMP16P51512 607 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 CD300CQ08708 224 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 OR8A1Q8NGG7 326 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 ZNF519Q8TB69 540 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 ZFP30Q9Y2G7 519 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 OR51B2Q9Y5P1 312 aa18.4■□□□□ 0.54
RNF40-201ENST00000324685 IZUMO4Q1ZYL8 232 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 ALX4Q9H161 411 aaPredicted RBP18.39■□□□□ 0.53
RNF40-201ENST00000324685 HIGD1AQ9Y241 93 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 CCL27Q9Y4X3 112 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 DOCK2Q92608 1830 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 H1FOOQ8IZA3 346 aaPredicted RBP18.39■□□□□ 0.53
RNF40-201ENST00000324685 ST6GALNAC2Q9UJ37 374 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 PCOLCE2Q9UKZ9 415 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 PGLYRP3Q96LB9 341 aa18.39■□□□□ 0.53
RNF40-201ENST00000324685 FAM3BP58499 235 aaPredicted RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 TMEM91Q6ZNR0 172 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 ITGB4P16144 1822 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 LIFP15018 202 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 CD82P27701 267 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 KIR2DL1P43626 348 aaPredicted RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 KIR2DL2P43627 348 aaPredicted RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 C3AR1Q16581 482 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 MS4A5Q9H3V2 200 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 MMP9P14780 707 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 PNLIPP16233 465 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 ATP6V0CP27449 155 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 C16orf82Q7Z2V1 217 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 LRRC75AQ8NAA5 344 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 SHROOM3Q8TF72 1996 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 GMPPAQ96IJ6 420 aaPredicted RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 CDC42EP3Q9UKI2 254 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 HIST1H1BP16401 226 aaKnown RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 SSX8Q7RTT4 187 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 OR2V2Q96R30 315 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 TMUB1Q9BVT8 246 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 KLK13Q9UKR3 277 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 PAPPA2Q9BXP8 1791 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 CD160O95971 181 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 C1orf174Q8IYL3 243 aa18.38■□□□□ 0.53
RNF40-201ENST00000324685 YBX2Q9Y2T7 364 aaKnown RBP18.38■□□□□ 0.53
RNF40-201ENST00000324685 HOXA4Q00056 320 aaPredicted RBP18.37■□□□□ 0.53
RNF40-201ENST00000324685 UBE2V2Q15819 145 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 ABLIM2Q6H8Q1 611 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 LDLRAD3Q86YD5 345 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 EVPLQ92817 2033 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 J3QR06 171 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 RBM11P57052 281 aaKnown RBP18.37■□□□□ 0.53
RNF40-201ENST00000324685 PAFAH1B2P68402 229 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 FAM222BQ8WU58 562 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 ZNF552Q9H707 407 aaPredicted RBP18.37■□□□□ 0.53
RNF40-201ENST00000324685 NTN1O95631 604 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 HBZP02008 142 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 CCL3P10147 92 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 GCSHP23434 173 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 WDR54Q9H977 334 aa18.37■□□□□ 0.53
RNF40-201ENST00000324685 TNFRSF19Q9NS68 423 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms