RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 LFNGQ8NES3 379 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 ST8SIA1Q92185 356 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 GTF3AQ92664 365 aaKnown RBP12.26□□□□□ -0.45
PABPC1-201ENST00000318607 MSI2Q96DH6 328 aaKnown RBP12.26□□□□□ -0.45
PABPC1-201ENST00000318607 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 CACNG5Q9UF02 275 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 MED13LQ71F56 2210 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 GRIFINA4D1Z8 144 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 C5orf67F2Z3F1 127 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 SCRG1O75711 98 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 PTBP3O95758 552 aaKnown RBP12.26□□□□□ -0.45
PABPC1-201ENST00000318607 SELEP16581 610 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 TCN2P20062 427 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 PKIAP61925 76 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 CARFQ8N187 725 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 SLC25A31Q9H0C2 315 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 HS3ST3A1Q9Y663 406 aa12.26□□□□□ -0.45
PABPC1-201ENST00000318607 COL8A2P25067 703 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 GRB2P62993 217 aaKnown RBP12.25□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF92Q03936 586 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 PLPPR5Q32ZL2 321 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 HIKESHIQ53FT3 197 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 REC114Q7Z4M0 266 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 Q96M66 194 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 FAM103A1Q9BTL3 118 aaKnown RBP12.25□□□□□ -0.45
PABPC1-201ENST00000318607 SCRT1Q9BWW7 348 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
PABPC1-201ENST00000318607 TUBD1Q9UJT1 453 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 DUX1O43812 170 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 PSG2P11465 335 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 S100A7P31151 101 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 HYAL1Q12794 435 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 OR4X1Q8NH49 305 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 MVB12AQ96EY5 273 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 OXGR1Q96P68 337 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 EML6Q6ZMW3 1958 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 KRASP01116 189 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 SSPNQ14714 243 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 BCO1Q9HAY6 547 aa12.25□□□□□ -0.45
PABPC1-201ENST00000318607 A0A0G2JRQ6 117 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 CD300LBA8K4G0 201 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 GLIPR1P48060 266 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 COL4A2P08572 1712 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 PTPRZ1P23471 2315 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-201ENST00000318607 IGKV3D-11A0A0A0MRZ8 115 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 IL13RA2Q14627 380 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 AARDQ4LEZ3 155 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF100Q8IYN0 542 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 FGFBP3Q8TAT2 258 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 PNRC2Q9NPJ4 139 aaKnown RBP12.24□□□□□ -0.45
PABPC1-201ENST00000318607 KIAA1456Q9P272 454 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 MYOTQ9UBF9 498 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 PPIAL4AQ9Y536 164 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 IGHV1OR21-1A0A087WYE8 117 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 LYL1P12980 280 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF133P52736 654 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-201ENST00000318607 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
PABPC1-201ENST00000318607 BLACEA4D250 179 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 CXCL13O43927 109 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 AMBPP02760 352 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 BCL3P20749 454 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 FAM53AQ6NSI3 398 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-201ENST00000318607 SSX7Q7RTT5 188 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-201ENST00000318607 OR51G1Q8NGK1 321 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 OR13D1Q8NGV5 346 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 DDA1Q9BW61 102 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 MAP1LC3B2A6NCE7 125 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 LRRC3CA6NJW4 275 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 MPZP25189 248 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 SLC35B1P78383 322 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 SLC25A47Q6Q0C1 308 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ANKRD37Q7Z713 158 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 CLDND2Q8NHS1 167 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 MAP1LC3BQ9GZQ8 125 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 TMED3Q9Y3Q3 217 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF320A2RRD8 509 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 SIRPB1O00241 398 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ZNF737O75373 536 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 CCL3P10147 92 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 DRD1P21728 446 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 GALR1P47211 349 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 TFPI2P48307 235 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 OR10A7Q8NGE5 316 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 PP6455Q8WZ26 134 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 MOB1AQ9H8S9 216 aa12.23□□□□□ -0.45
PABPC1-201ENST00000318607 ZFAND5O76080 213 aa12.22□□□□□ -0.45
PABPC1-201ENST00000318607 FASLGP48023 281 aa12.22□□□□□ -0.45
PABPC1-201ENST00000318607 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
PABPC1-201ENST00000318607 GNB2P62879 340 aa12.22□□□□□ -0.45
PABPC1-201ENST00000318607 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
PABPC1-201ENST00000318607 FAM78BQ5VT40 261 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms