RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 OR10S1Q8NGN2 331 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 RTBDNQ9BSG5 229 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 SRD5A3Q9H8P0 318 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF780BQ9Y6R6 833 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 CCKARP32238 428 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 CDKN2AP42771 156 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 UBE2V1Q13404 147 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 TMEM108Q6UXF1 575 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 DAZLQ92904 295 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 TOMM40LQ969M1 308 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 REEP6Q96HR9 211 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 C4orf45Q96LM5 186 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 RNF2Q99496 336 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 MTHFD2LQ9H903 347 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 GPR35Q9HC97 309 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 OSGIN2Q9Y236 505 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 MAP1AP78559 2803 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 CCDC168Q8NDH2 2452 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 ETV2O00321 342 aaPredicted RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 TNFSF12O43508 249 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 GPR137BO60478 399 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 GLI4P10075 376 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 FPR2P25090 351 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 TAF9Q16594 264 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 HLA-DQA1Q5Y7H0 255 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 HIST2H2BCQ6DN03 193 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 CALHM1Q8IU99 346 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 FNDC9Q8TBE3 224 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 MRPL24Q96A35 216 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 PCGF1Q9BSM1 259 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 DHDHQ9UQ10 334 aa8.12□□□□□ -1.11
CAPN3-201ENST00000318023 MRPS28Q9Y2Q9 187 aaKnown RBP8.12□□□□□ -1.11
CAPN3-201ENST00000318023 IGKV3D-11A0A0A0MRZ8 115 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 A0A0G2JMM0 328 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1W2PPB8 328 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1W2PRS3 328 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 KIR3DP1A8MWS1 328 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 PPP5D1E7EU14 171 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 J3QKU1 62 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 TSPAN2O60636 221 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 LMX1BO60663 402 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 VAMP5O95183 116 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 OPN1MWP04001 364 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 OPN1MW2P0DN77 364 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 OPN1MW3P0DN78 364 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ACAA2P42765 397 aaKnown RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 DNASE1L1P49184 302 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 SUCLG1P53597 346 aaKnown RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 EIPR1Q53HC9 387 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 LHFPL4Q7Z7J7 247 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 SLC25A44Q96H78 314 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 TAAR6Q96RI8 345 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 LYRM4Q9HD34 91 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 KIAA1456Q9P272 454 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF107Q9UII5 783 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 LOC102723996A0A087X1L8 192 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 A0A1B0GW64 132 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 CPMP14384 443 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 CSNK2A2P19784 350 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 OMGP23515 440 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 CDKN1AP38936 164 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 CDC34P49427 236 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-201ENST00000318023 CYB561P49447 251 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 EXT1Q16394 746 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF766Q5HY98 468 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ALG10BQ5I7T1 473 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 SLC16A9Q7RTY1 509 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 NICN1Q9BSH3 213 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 DEFB127Q9H1M4 99 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 PLSCR2Q9NRY7 297 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 ZNF319Q9P2F9 582 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 MAST4O15021 2626 aa8.11□□□□□ -1.11
CAPN3-201ENST00000318023 TNFSF13O75888 250 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ZFAND5O76080 213 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 DDAH2O95865 285 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 RPL19P84098 196 aaKnown RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 MFAP5Q13361 173 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 C1QL3Q5VWW1 255 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 C9orf40Q8IXQ3 194 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 OR52R1Q8NGF1 315 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 VAMP8Q9BV40 100 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 ONECUT2O95948 504 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 RBMXP38159 391 aaKnown RBP8.1□□□□□ -1.11
CAPN3-201ENST00000318023 PDLIM4P50479 330 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 RIPPLY3P57055 190 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 FBXW4P57775 412 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 HIST1H3AP68431 136 aa8.1□□□□□ -1.11
CAPN3-201ENST00000318023 UNC119Q13432 240 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms