RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 A0A1W2PNV4 684 aa12□□□□□ -0.49
SPAST-201ENST00000315285 SEC14L6B5MCN3 397 aa12□□□□□ -0.49
SPAST-201ENST00000315285 SPINK4O60575 86 aa12□□□□□ -0.49
SPAST-201ENST00000315285 PMCHP20382 165 aa12□□□□□ -0.49
SPAST-201ENST00000315285 FDX2Q6P4F2 183 aa12□□□□□ -0.49
SPAST-201ENST00000315285 TOMM20LQ6UXN7 152 aa12□□□□□ -0.49
SPAST-201ENST00000315285 CDX2Q99626 313 aaPredicted RBP12□□□□□ -0.49
SPAST-201ENST00000315285 EPOPA6NHQ4 379 aa12□□□□□ -0.49
SPAST-201ENST00000315285 PSG2P11465 335 aa12□□□□□ -0.49
SPAST-201ENST00000315285 PAX5Q02548 391 aa12□□□□□ -0.49
SPAST-201ENST00000315285 NCMAPQ5T1S8 102 aa12□□□□□ -0.49
SPAST-201ENST00000315285 PMS2CLQ68D20 193 aa12□□□□□ -0.49
SPAST-201ENST00000315285 SLC25A40Q8TBP6 338 aa12□□□□□ -0.49
SPAST-201ENST00000315285 NPAS1Q99742 590 aa12□□□□□ -0.49
SPAST-201ENST00000315285 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
SPAST-201ENST00000315285 Q9N2K0 584 aa12□□□□□ -0.49
SPAST-201ENST00000315285 GZMHP20718 246 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 ERVS71-1P61550 626 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 KLHDC1Q8N7A1 406 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 RNF122Q9H9V4 155 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 H3BQ15 152 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
SPAST-201ENST00000315285 RANP62826 216 aaKnown RBP11.99□□□□□ -0.49
SPAST-201ENST00000315285 NHLH2Q02577 135 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 OR5I1Q13606 314 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 Q5BKY6 102 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 ZNRF4Q8WWF5 429 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 AICDAQ9GZX7 198 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 G6PC2Q9NQR9 355 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 PRSS50Q9UI38 385 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 PSME4Q14997 1843 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 B4DEV8 164 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 GAPDHP04406 335 aaKnown RBP11.99□□□□□ -0.49
SPAST-201ENST00000315285 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 MOB3AQ96BX8 217 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 ZNF488Q96MN9 340 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 APC2O95996 2303 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 IGHV1-45A0A0A0MS14 117 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 C11orf94C9JXX5 98 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 FCN1O00602 326 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 F2RP25116 425 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 BHLHA15Q7RTS1 189 aaPredicted RBP11.99□□□□□ -0.49
SPAST-201ENST00000315285 MDP1Q86V88 176 aa11.99□□□□□ -0.49
SPAST-201ENST00000315285 B4E171 279 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 RBP4P02753 201 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 TSPAN7P41732 249 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 SULT1A2P50226 295 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 ADAMTS17Q8TE56 1095 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 RPEQ96AT9 228 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 VAMP8Q9BV40 100 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 OR1A1Q9P1Q5 309 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 AGFG2O95081 481 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 IGKV3-11P04433 115 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 P2RY4P51582 365 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 GNB2P62879 340 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 C1QTNF12Q5T7M4 302 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 ZBTB34Q8NCN2 500 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 TTTY12Q9BZ98 90 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 PDCD11Q14690 1871 aaKnown RBP11.98□□□□□ -0.49
SPAST-201ENST00000315285 KIAA1324LA8MWY0 1029 aaPredicted RBP11.98□□□□□ -0.49
SPAST-201ENST00000315285 TBX6O95947 436 aaPredicted RBP11.98□□□□□ -0.49
SPAST-201ENST00000315285 MUC1P15941 1255 aaPredicted RBP11.98□□□□□ -0.49
SPAST-201ENST00000315285 GUCA2BQ16661 112 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 MRGPRGQ86SM5 289 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 ANKRD36A6QL64 1941 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 DEDDO75618 318 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 SLC25A5P05141 298 aaKnown RBP11.98□□□□□ -0.49
SPAST-201ENST00000315285 G6PCP35575 357 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 MS4A10Q96PG2 267 aa11.98□□□□□ -0.49
SPAST-201ENST00000315285 A0A1W2PN81 502 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 C17orf51A8MQB3 221 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 PITX3O75364 302 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 TOX4O94842 621 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 SP1P08047 785 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 HFEQ30201 348 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 BCL2L2Q92843 193 aaPredicted RBP11.97□□□□□ -0.49
SPAST-201ENST00000315285 OR2J1Q9GZK6 312 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 GYPAP02724 150 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 TMEM255AQ5JRV8 349 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 FNDC7Q5VTL7 733 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 INO80CQ6PI98 192 aaPredicted RBP11.97□□□□□ -0.49
SPAST-201ENST00000315285 MOGAT3Q86VF5 341 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
SPAST-201ENST00000315285 HSD17B10Q99714 261 aaKnown RBP11.97□□□□□ -0.49
SPAST-201ENST00000315285 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 MFSD2BA6NFX1 497 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 SLC31A2O15432 143 aa11.97□□□□□ -0.49
SPAST-201ENST00000315285 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
SPAST-201ENST00000315285 SIGLEC14Q08ET2 396 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms