RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KISS1RQ969F8 398 aaPredicted RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 SOSTQ9BQB4 213 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 GLIPR1P48060 266 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 FMODQ06828 376 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 PMS2P11Q13670 270 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CNEP1R1Q8N9A8 125 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 LRRC61Q9BV99 259 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 URGCP-MRPS24S4R325 110 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 RPL36A-HNRNPH2H7BZ11 118 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 FGF12P61328 243 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 RAB32Q13637 225 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 SF3B6Q9Y3B4 125 aaKnown RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 TRAV20A0A0B4J274 112 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 UBE2L5PA0A1B0GUS4 154 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 HPRT1P00492 218 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF660Q6AZW8 331 aaPredicted RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CLEC9AQ6UXN8 241 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 OR10G9Q8NGN4 311 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 OR10G7Q8NGN6 311 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 ZMAT3Q9HA38 289 aaKnown RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 AUP1Q9Y679 476 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 KCNMB2Q9Y691 235 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CIDEAO60543 219 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CTGFP29279 349 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 TRAV38-1A0A0B4J264 116 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 BGLAPP02818 100 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 FAHP16930 419 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 CXCL3P19876 107 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 ACP1P24666 158 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 FABP6P51161 128 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 VAMP3Q15836 100 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 GCSAMQ8N6F7 178 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 LOXL4Q96JB6 756 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 GPR132Q9UNW8 380 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 M0R1X1 148 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 ACAA1P09110 424 aaPredicted RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 FABP4P15090 132 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 C1orf61Q13536 156 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM240Q5SV17 173 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 LRTM2Q8N967 370 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 NPVFQ9HCQ7 196 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
COL6A5-202ENST00000312481 WSB2Q9NYS7 404 aaPredicted RBP7.75□□□□□ -1.17
COL6A5-202ENST00000312481 H3BSH0 61 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ADAM20O43506 726 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 PRKRAO75569 313 aaKnown RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR10J4P0C629 311 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 F2RP25116 425 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 PTPMT1Q8WUK0 201 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 SPANXCQ9NY87 97 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 H3BQ15 152 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ADAP1O75689 374 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 PTNP21246 168 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 BCDIN3DQ7Z5W3 292 aaKnown RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF658BQ4V348 819 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 LHX8Q68G74 356 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF761Q86XN6 746 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR1C1Q15619 314 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 TCTN1Q2MV58 587 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 HMGN2P46Q86SG4 172 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR2M7Q8NG81 312 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR8B12Q8NGG6 310 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ZNF552Q9H707 407 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 HELTA6NFD8 242 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR2T8A6NH00 312 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 CNIH1O95406 144 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 STAG3L3P0CL85 134 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 RBM11P57052 281 aaKnown RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 CXCL16Q9H2A7 254 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 PLSCR3Q9NRY6 295 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 A0A1W2PPV9 198 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 DBX1A6NMT0 343 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 CTSSP25774 331 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 HIST3H3Q16695 136 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 THSD4Q6ZMP0 1018 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 LINC00518Q8N0U6 118 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 COL5A1P20908 1838 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 GPM6AP51674 278 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 FAM27D1Q5T7N8 215 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 TMEM108Q6UXF1 575 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 C1orf162Q8NEQ5 155 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 OR10D4PQ8NGN7 298 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
COL6A5-202ENST00000312481 ZFP30Q9Y2G7 519 aa7.74□□□□□ -1.17
COL6A5-202ENST00000312481 TRBV6-7A0A0A0MS04 114 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 IGFBP1P08833 259 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 ELLP55199 621 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 ZXDCQ2QGD7 858 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 FAM109BQ6ICB4 259 aaPredicted RBP7.73□□□□□ -1.17
COL6A5-202ENST00000312481 OR4A47Q6IF82 309 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 STPG3Q8N7X2 389 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 M0QZ24 198 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 B3GALT4O96024 378 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 AMTP48728 403 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 CEACAM21Q3KPI0 293 aa7.73□□□□□ -1.17
COL6A5-202ENST00000312481 MBNL1Q9NR56 388 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms