RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 KIAA1324LA8MWY0 1029 aaPredicted RBP15.03■□□□□ -0
HMGA1-201ENST00000311487 MCRIP1C9JLW8 97 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 NKX2-5P52952 324 aaPredicted RBP15.03■□□□□ -0
HMGA1-201ENST00000311487 KRBOX4Q5JUW0 171 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 UBALD1Q8TB05 177 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 PHF21AQ96BD5 680 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 MSI2Q96DH6 328 aaKnown RBP15.03■□□□□ -0
HMGA1-201ENST00000311487 DNTTIP1Q9H147 329 aa15.03■□□□□ -0
HMGA1-201ENST00000311487 GSTT2BP0CG30 244 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 CDNFQ49AH0 187 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 OR4K15Q8NH41 348 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 PTX4Q96A99 478 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 RCC2Q9P258 522 aaKnown RBP15.02■□□□□ -0
HMGA1-201ENST00000311487 AK3Q9UIJ7 227 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 KIF25Q9UIL4 384 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 ZFHX3Q15911 3703 aa15.02■□□□□ -0
HMGA1-201ENST00000311487 TMEM235A6NFC5 223 aa15.02□□□□□ -0.01
HMGA1-201ENST00000311487 HEXAP06865 529 aa15.02□□□□□ -0.01
HMGA1-201ENST00000311487 IGHV4-31P0DP07 118 aa15.02□□□□□ -0.01
HMGA1-201ENST00000311487 LINC00596Q86U02 117 aa15.02□□□□□ -0.01
HMGA1-201ENST00000311487 FAM185AQ8N0U4 392 aa15.02□□□□□ -0.01
HMGA1-201ENST00000311487 RANGRFQ9HD47 186 aaPredicted RBP15.02□□□□□ -0.01
HMGA1-201ENST00000311487 LOC105371242A0A075B767 164 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 NAP1L6A6NFF2 107 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 DHFRP00374 187 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 TGFAP01135 160 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 NAT1P18440 290 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 RPL31P62899 125 aaKnown RBP15.01□□□□□ -0.01
HMGA1-201ENST00000311487 GUCA2AQ02747 115 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 MAFIPQ8WZ33 124 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 DMRTB1Q96MA1 342 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 BEX2Q9BXY8 128 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 IFT22Q9H7X7 185 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 MTFP1Q9UDX5 166 aa15.01□□□□□ -0.01
HMGA1-201ENST00000311487 MEIKINA0A087WXM9 373 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 A0A0A6YYJ9 748 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 C7orf66A4D0T2 115 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 MEIS3P1A6NDR6 274 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 RRAS2P62070 204 aaPredicted RBP15□□□□□ -0.01
HMGA1-201ENST00000311487 ZNF273Q14593 569 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FYTTD1Q96QD9 318 aaKnown RBP15□□□□□ -0.01
HMGA1-201ENST00000311487 ZNF230Q9UIE0 474 aaPredicted RBP15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A10PA6NDY2 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A18PA6NE21 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A16PA6NEW6 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A20PA6NIJ5 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A8PA6NJQ4 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A7PA6NKC0 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A22PA8MWA6 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A12PA8MX19 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A5PA8MXJ8 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A23PA8MXZ1 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 MGST3O14880 152 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 RBBP9O75884 186 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A15PP0C7V4 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A13PP0C7W8 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A14PP0C7W9 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 FAM90A24PP0C7X0 464 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 CCL3L1P16619 93 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 CD83Q01151 205 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 TMEM200BQ69YZ2 307 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 Q6ZPA2 131 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 Q71RC1 249 aaPredicted RBP15□□□□□ -0.01
HMGA1-201ENST00000311487 TRAPPC6BQ86SZ2 158 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 OR5D13Q8NGL4 314 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 NUDCD2Q8WVJ2 157 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 GHITMQ9H3K2 345 aa15□□□□□ -0.01
HMGA1-201ENST00000311487 H2AFB2P0C5Z0 115 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 HIST1H1DP16402 221 aaKnown RBP14.99□□□□□ -0.01
HMGA1-201ENST00000311487 ZNF16P17020 682 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-201ENST00000311487 RCC1P18754 421 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-201ENST00000311487 OMGP23515 440 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 PRSS3P35030 304 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 RAG2P55895 527 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 ZFP69Q49AA0 526 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 PRR18Q8N4B5 295 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 MRGPRDQ8TDS7 321 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 FAM234AQ9H0X4 552 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 C20orf85Q9H1P6 137 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 SPACA1Q9HBV2 294 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 CHMP1AQ9HD42 196 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-201ENST00000311487 MCUBQ9NWR8 336 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 ONECUT1Q9UBC0 465 aa14.99□□□□□ -0.01
HMGA1-201ENST00000311487 RPUSD1Q9UJJ7 312 aaKnown RBP14.99□□□□□ -0.01
HMGA1-201ENST00000311487 A0A0A6YYH2 397 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 PPIAL4CA0A0B4J2A2 164 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 A6NJ64 397 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 MSMBP08118 114 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 PPIAL4GP0DN37 164 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 S100A1P23297 94 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 P2RX3P56373 397 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 ARF6P62330 175 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 FAAP20Q6NZ36 180 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 FAHD2BQ6P2I3 314 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-201ENST00000311487 TCF23Q7RTU1 214 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 OR13A1Q8NGR1 328 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 OR56B4Q8NH76 319 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 PPP1R35Q8TAP8 253 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 GPX8Q8TED1 209 aa14.98□□□□□ -0.01
HMGA1-201ENST00000311487 FAHD2AQ96GK7 314 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms