RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CD3EP07766 207 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 MMP9P14780 707 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 SRD5A2P31213 254 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 RSPO2Q6UXX9 243 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 SF3B5Q9BWJ5 86 aaKnown RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 GPR27Q9NS67 375 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 RAXQ9Y2V3 346 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 WNT1P04628 370 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CD1BP29016 333 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 PPP2CBP62714 309 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 FAM27D1Q5T7N8 215 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 OR2W5A6NFC9 320 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CCR2P41597 374 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 AGERQ15109 404 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 GLCCI1Q86VQ1 547 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 HLA-DQA1P01909 254 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 HEXA-AS1Q9H8Q6 139 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 PLEKHB1Q9UF11 243 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 NKX2-2O95096 273 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 METTL26Q96S19 204 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 NEU3Q9UQ49 428 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 A0A1B0GV72 72 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 DEFB108AA8MXU0 73 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 MBD3L1Q8WWY6 194 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 ABCA4P78363 2273 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF25P17030 456 aaPredicted RBP13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CALHM1Q8IU99 346 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 CNTD2Q9H8S5 307 aa13.69□□□□□ -0.22
HCFC1-201ENST00000310441 H0Y8X5 98 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF774Q6NX45 483 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 GPBAR1Q8TDU6 330 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 TRPM3Q9HCF6 1732 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF735P0CB33 412 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 NMUP48645 174 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 ANKRD33Q7Z3H0 272 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 TMEM179BQ7Z7N9 219 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 OR10D3Q8NH80 312 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 DNAJB12Q9NXW2 375 aaKnown RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 CXorf65A6NEN9 183 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 PLPP3O14495 311 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 GABRG2P18507 467 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 INSIG2Q9Y5U4 225 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 RBFOX2O43251 390 aaKnown RBP eCLIP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 MRPS11P82912 194 aaKnown RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 TDHQ8IZJ6 230 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 NUBPLQ8TB37 319 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 ZMIZ1Q9ULJ6 1067 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 FAM206AQ9NX38 181 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 FUT9Q9Y231 359 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 TCRBV5S1A1TA0A578 114 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 SNURFLB1AK76 121 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
HCFC1-201ENST00000310441 OR10J6PQ8NGY7 276 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 ASB5Q8WWX0 329 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 PTP4A1Q93096 173 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 RNF122Q9H9V4 155 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 UQCR10Q9UDW1 63 aa13.68□□□□□ -0.22
HCFC1-201ENST00000310441 LNP1A1A4G5 178 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 PWWP2BQ6NUJ5 590 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 KCNE3Q9Y6H6 103 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 EBLN2Q6P2I7 272 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 GNRHR2Q96P88 292 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 KLK10O43240 276 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 CDKN2AP42771 156 aaKnown RBP13.67□□□□□ -0.22
HCFC1-201ENST00000310441 SLC35B1P78383 322 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 PLSCR3Q9NRY6 295 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 HMX2A2RU54 273 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 KCNAB3O43448 404 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 IGLV3-25P01717 112 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 CRHP06850 196 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 SELENOTP62341 195 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 OR4X1Q8NH49 305 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 GALNT14Q96FL9 552 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF385DQ9H6B1 395 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 MAS1LP35410 378 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 PRSS36Q5K4E3 855 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 DTD1Q8TEA8 209 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 SGK494Q96LW2 274 aa13.67□□□□□ -0.22
HCFC1-201ENST00000310441 ZNF32P17041 273 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 TMEM183AQ8IXX5 376 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 HARBI1Q96MB7 349 aa13.66□□□□□ -0.22
HCFC1-201ENST00000310441 ZFP64Q9NPA5 681 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms