RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 B3GALNT1O75752 331 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 CASP6P55212 293 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 RND3P61587 244 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 SPRNQ5BIV9 151 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 GGNBP1Q5YKI7 109 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 ZNF818PQ6ZRF7 136 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 ACOT7LQ6ZUV0 252 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 SLC51BQ86UW2 128 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 GLYATL2Q8WU03 294 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 GSKIPQ9P0R6 139 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 OR2W1Q9Y3N9 320 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 C3orf85A0A1B0GTC6 90 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 TUBAL3A6NHL2 446 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 SRRM5B3KS81 715 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 PHF1O43189 567 aaPredicted RBP17.88■□□□□ 0.45
ATG4D-201ENST00000309469 EGR1P18146 543 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 IAH1Q2TAA2 248 aaPredicted RBP17.88■□□□□ 0.45
ATG4D-201ENST00000309469 SLC35E4Q6ICL7 350 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 PCNPQ8WW12 178 aaKnown RBP17.88■□□□□ 0.45
ATG4D-201ENST00000309469 MSI2Q96DH6 328 aaKnown RBP17.88■□□□□ 0.45
ATG4D-201ENST00000309469 CCL28Q9NRJ3 127 aa17.88■□□□□ 0.45
ATG4D-201ENST00000309469 HEATR1Q9H583 2144 aaKnown RBP17.87■□□□□ 0.45
ATG4D-201ENST00000309469 RNF222A6NCQ9 220 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 LEUTXA8MZ59 168 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 H0YIZ8 118 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 ABCD4O14678 606 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 TFF1P04155 84 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 COL10A1Q03692 680 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 HMGN3Q15651 99 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 TBC1D26Q86UD7 250 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 MOGAT3Q86VF5 341 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 LGI3Q8N145 548 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 PRR18Q8N4B5 295 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 INO80EQ8NBZ0 244 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-201ENST00000309469 C18orf12Q96KH6 178 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 TP53RKQ96S44 253 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 TAF9BQ9HBM6 251 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 OR1A1Q9P1Q5 309 aa17.87■□□□□ 0.45
ATG4D-201ENST00000309469 KANTRA0A1W2PQU2 76 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 HSD17B6O14756 317 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ALKAL2Q6UX46 152 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ZGRF1Q86YA3 2104 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 FAM90A1Q86YD7 464 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 SCARB1Q8WTV0 552 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ITLN1Q8WWA0 313 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 METRNQ9UJH8 293 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ERRFI1Q9UJM3 462 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-201ENST00000309469 AUP1Q9Y679 476 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-201ENST00000309469 PRDX2P32119 198 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 CA7P43166 264 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 OR3A1P47881 315 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 BSPH1Q075Z2 132 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 AESQ08117 197 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 RAB32Q13637 225 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 PRSS54Q6PEW0 395 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 GCSAMQ8N6F7 178 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 CD177Q8N6Q3 437 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 ST6GALNAC3Q8NDV1 305 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 DCUN1D4Q92564 292 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 KCNIP1Q9NZI2 227 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 SHANK1Q9Y566 2161 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 IGF2RP11717 2491 aa17.86■□□□□ 0.45
ATG4D-201ENST00000309469 RP1L1Q8IWN7 2480 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-201ENST00000309469 SPDEFO95238 335 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 PSG2P11465 335 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 LYL1P12980 280 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 LYZL2Q7Z4W2 148 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 CMTM1Q8IZ96 169 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 COQ2Q96H96 371 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 WFIKKN1Q96NZ8 548 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 KIF25Q9UIL4 384 aa17.85■□□□□ 0.45
ATG4D-201ENST00000309469 FBXO9Q9UK97 447 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-201ENST00000309469 MAP1BP46821 2468 aaKnown RBP17.85■□□□□ 0.45
ATG4D-201ENST00000309469 BCL2L11O43521 198 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 IGHV1-46P01743 117 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 GATA4P43694 442 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 ID4P47928 161 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 UBA52P62987 128 aaKnown RBP17.84■□□□□ 0.45
ATG4D-201ENST00000309469 ESCO2Q56NI9 601 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 BOLLQ8N9W6 283 aaKnown RBP17.84■□□□□ 0.45
ATG4D-201ENST00000309469 UBALD1Q8TB05 177 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 SHARPINQ9H0F6 387 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 TMEM222Q9H0R3 208 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 ZDHHC8Q9ULC8 765 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 LHBP01229 141 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 HEXAP06865 529 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 SRPXP78539 464 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 TNFAIP6P98066 277 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-201ENST00000309469 TESK1Q15569 626 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 BEX5Q5H9J7 111 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 OR10V1Q8NGI7 309 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 LHFPL5Q8TAF8 219 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 SEBOXQ9HB31 216 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-201ENST00000309469 OR5AC2Q9NZP5 309 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 DNAJB11Q9UBS4 358 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 IL19Q9UHD0 177 aa17.84■□□□□ 0.45
ATG4D-201ENST00000309469 SPTBN4Q9H254 2564 aa17.83■□□□□ 0.44
ATG4D-201ENST00000309469 HSPA12AO43301 675 aa17.83■□□□□ 0.44
ATG4D-201ENST00000309469 KCNAB3O43448 404 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms