RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RNASEK-C17orf49H0YIS7 233 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 GPR31O00270 319 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 MPZL1O95297 269 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ACTL6AO96019 429 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 IFNA21P01568 189 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PMP2P02689 132 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 CSN2P05814 226 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 GLAP06280 429 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 CTSDP07339 412 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 FCGR3AP08637 254 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 SEC11BP0C7V7 166 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PGA4P0DJD7 388 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PGA3P0DJD8 388 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 HLA-DOBP13765 273 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 RPS2P15880 293 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 GNB3P16520 340 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ADCYAP1P18509 176 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 EIF1P41567 113 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR3A2P47893 321 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ASCL1P50553 236 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 DVL1P1P54792 670 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TMEM50BP56557 158 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 RAB5BP61020 215 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 SUPT4H1P63272 117 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 POU3F1Q03052 451 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 FMODQ06828 376 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 SMCO1Q147U7 214 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 SLC10A1Q14973 349 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ATXN7L3Q14CW9 347 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PEA15Q15121 130 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR7A5Q15622 319 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 LRRC37A5PQ49AS3 106 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 BEX5Q5H9J7 111 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 GPR157Q5UAW9 335 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PRAMEF20Q5VT98 475 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TMEM268Q5VZI3 342 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR52W1Q6IF63 320 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 UNQ6126/PRO20091Q6UXV3 157 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 FOXL2NBQ6ZUU3 175 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 LINC00346Q8IVM7 164 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 UEVLDQ8IX04 471 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 LRTM2Q8N967 370 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 UBAC2Q8NBM4 344 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR10G3Q8NGC4 313 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR10S1Q8NGN2 331 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR13G1Q8NGZ3 307 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PAQR8Q8TEZ7 354 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TMED6Q8WW62 240 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 INTS12Q96CB8 462 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 CMBLQ96DG6 245 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 RRNAD1Q96FB5 475 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 GALNT14Q96FL9 552 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 CPNE2Q96FN4 548 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TMEM41AQ96HV5 264 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OXGR1Q96P68 337 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 MICU1Q9BPX6 476 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TCEAL7Q9BRU2 100 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 RTBDNQ9BSG5 229 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 OR11A1Q9GZK7 315 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TLNRD1Q9H1K6 362 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 SAV1Q9H4B6 383 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 C5orf66Q9H5L9 145 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 PTGES2Q9H7Z7 377 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 METTL8Q9H825 291 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ZMAT3Q9HA38 289 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TREM1Q9NP99 234 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ACKR4Q9NPB9 350 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 HSF4Q9ULV5 492 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 C14orf166Q9Y224 244 aaKnown RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 HDGFL3Q9Y3E1 203 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 TIMM10BQ9Y5J6 103 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 KPTNQ9Y664 436 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 LHFPL6Q9Y693 200 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 V9GYS6 101 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ARFGEF3Q5TH69 2177 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 A0A087WZY1 265 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 A0A0A6YYD4 124 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 BORCS7-ASMTA0A0B4J1R7 106 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 IGKV1D-43A0A0B4J1Z2 117 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 E5RGE8 158 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 H3BSH0 61 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 H7C1Q1 480 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SOCS1O15524 211 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 TRAF3IP2O43734 574 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 LMX1BO60663 402 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 DEDDO75618 318 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 VAMP5O95183 116 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 IFNA2P01563 188 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 MT-ND4LP03901 98 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 SMIM6P0DI80 62 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 CPT2P23786 658 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 DTYMKP23919 212 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 LOXP28300 417 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 OTX1P32242 354 aaPredicted RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 MAS1LP35410 378 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 TIMP3P35625 211 aa4.16□□□□□ -1.74
CKS1B-201ENST00000308987 RBMXP38159 391 aaKnown RBP4.16□□□□□ -1.74
CKS1B-201ENST00000308987 PTGFRP43088 359 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms