RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 HMGCLL1Q8TB92 370 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 ASB10Q8WXI3 467 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 TMEM218A2RU14 115 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 TSPAN2O60636 221 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 RPS4Y1P22090 263 aaKnown RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 PWWP2BQ6NUJ5 590 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 EXOGQ9Y2C4 368 aaKnown RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 CD82P27701 267 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 PPP1CCP36873 323 aaKnown RBP11.11□□□□□ -0.63
USP38-201ENST00000307017 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
USP38-201ENST00000307017 CELA2AP08217 269 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 ZNF418Q8TF45 676 aaPredicted RBP11.1□□□□□ -0.63
USP38-201ENST00000307017 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
USP38-201ENST00000307017 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 FAM181BA6NEQ2 426 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 LSMEM1Q8N8F7 131 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 ZDHHC22Q8N966 263 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 SAP30LQ9HAJ7 183 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 A0A1W2PPC4 97 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 HAND1O96004 215 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 RELBQ01201 579 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 PRSS54Q6PEW0 395 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 UBE2ZQ9H832 354 aaPredicted RBP11.1□□□□□ -0.63
USP38-201ENST00000307017 ADAMTSL1Q8N6G6 1762 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 A0A1W2PP11 408 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 HRASP01112 189 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 SSTR5P35346 364 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 NOVP48745 357 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 TMEM50BP56557 158 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 DPTQ07507 201 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 FAM53BQ14153 422 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 PRSS8Q16651 343 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 EID2BQ96D98 161 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 AKAP11Q9UKA4 1901 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 MUC1P15941 1255 aaPredicted RBP11.1□□□□□ -0.63
USP38-201ENST00000307017 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 Q9N2K0 584 aa11.1□□□□□ -0.63
USP38-201ENST00000307017 EGR1P18146 543 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 DLX1P56177 255 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 P2RX4Q99571 388 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 FIGNL2A6NMB9 653 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 STARD10Q9Y365 291 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 GNG7O60262 68 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 ABLIM2Q6H8Q1 611 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 IL20Q9NYY1 176 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 CD74P04233 296 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 SARAFQ96BY9 339 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 TEX101Q9BY14 249 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 MCM3APO60318 1980 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 C7orf71A4D174 169 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 WDR73Q6P4I2 378 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 ARID1AO14497 2285 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 A0A0U1RQV5 110 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 COL10A1Q03692 680 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 FAM131CQ96AQ9 280 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 NEU3Q9UQ49 428 aa11.09□□□□□ -0.63
USP38-201ENST00000307017 CHD5Q8TDI0 1954 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 DTX4Q9Y2E6 619 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 SPTBP11277 2137 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 TOGARAM1Q9Y4F4 1720 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 M0R296 226 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 OR2A4O95047 310 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 OR2A7Q96R45 310 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 SEBOXQ9HB31 216 aaPredicted RBP11.08□□□□□ -0.64
USP38-201ENST00000307017 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 OR4A8P0C604 315 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 CLDN18P56856 261 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
USP38-201ENST00000307017 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 ALG14Q96F25 216 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 IGHV3OR16-13A0A075B7E8 117 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 IGHV3-74A0A0B4J1X5 117 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 IGLV3-27P01718 113 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 PSG6Q00889 435 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 HLA-GP17693 338 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 MYOZ1Q9NP98 299 aaPredicted RBP11.08□□□□□ -0.64
USP38-201ENST00000307017 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 BTAF1O14981 1849 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms