RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TRAT1Q6PIZ9 186 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 TMEM185AQ8NFB2 350 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 OR10J5Q8NHC4 309 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 CAPSLQ8WWF8 208 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 NEU4Q8WWR8 484 aaPredicted RBP14.63□□□□□ -0.07
KRT28-201ENST00000306658 GAFA1Q96PS6 74 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 CCL13Q99616 98 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 CABLES2Q9BTV7 478 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 LIME1Q9H400 295 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 UBTD1Q9HAC8 227 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 TAF9BQ9HBM6 251 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 DLL4Q9NR61 685 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 LAMP3Q9UQV4 416 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 C14orf166Q9Y224 244 aaKnown RBP14.63□□□□□ -0.07
KRT28-201ENST00000306658 KIAA2026Q5HYC2 2103 aa14.63□□□□□ -0.07
KRT28-201ENST00000306658 TRAV39A0A0B4J263 110 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 SIGLEC5O15389 551 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 NFYAP23511 347 aaPredicted RBP14.62□□□□□ -0.07
KRT28-201ENST00000306658 UBE2MP61081 183 aaKnown RBP14.62□□□□□ -0.07
KRT28-201ENST00000306658 EDDM3AQ14507 147 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 PRR18Q8N4B5 295 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 IL1F10Q8WWZ1 152 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 MOB3AQ96BX8 217 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 KIRREL1Q96J84 757 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 LURAP1Q96LR2 239 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 NCOR1P1Q9H4R4 102 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 C5orf66Q9H5L9 145 aa14.62□□□□□ -0.07
KRT28-201ENST00000306658 TRBV6-7A0A0A0MS04 114 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 IGKV1-6A0A0C4DH72 117 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 TMPRSS2O15393 492 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 NDUFA2O43678 99 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 PPYP01298 95 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 HNRNPCP07910 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
KRT28-201ENST00000306658 ZNF728P0DKX0 622 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 AKR1C4P17516 323 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 GZMHP20718 246 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ERP29P30040 261 aaKnown RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 UCP3P55916 312 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 BAMBIQ13145 260 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 TMEM128Q5BJH2 165 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 C5orf24Q7Z6I8 188 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ZNF565Q8N9K5 539 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ZNF431Q8TF32 576 aaPredicted RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 TOMM40LQ969M1 308 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 GALMQ96C23 342 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ZNF221Q9UK13 617 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ODAMA1E959 279 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 FAM172BPA6NC97 362 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 NPIPB11E5RHQ5 1161 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 AADACP22760 399 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 P2RX3P56373 397 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 EDDM3BP56851 147 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 FXYD4P59646 89 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 MRPS11P82912 194 aaKnown RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 TPRX1Q8N7U7 411 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 ADAD2Q8NCV1 583 aaKnown RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 OR52B4Q8NGK2 314 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 MRGPRDQ8TDS7 321 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 RTBDNQ9BSG5 229 aaPredicted RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 OPN4Q9UHM6 478 aa14.61□□□□□ -0.07
KRT28-201ENST00000306658 UBR5O95071 2799 aaPredicted RBP14.61□□□□□ -0.07
KRT28-201ENST00000306658 HRNRQ86YZ3 2850 aaPredicted RBP14.6□□□□□ -0.07
KRT28-201ENST00000306658 HSPA12AO43301 675 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 FSTL3O95633 263 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 HLA-AP01891 365 aaKnown RBP14.6□□□□□ -0.07
KRT28-201ENST00000306658 CTSDP07339 412 aaPredicted RBP14.6□□□□□ -0.07
KRT28-201ENST00000306658 COL8A2P25067 703 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 IL2RGP31785 369 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 DHRS2Q13268 280 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 LYG2Q86SG7 212 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 SLC38A6Q8IZM9 456 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 MUC20Q8N307 709 aaPredicted RBP14.6□□□□□ -0.07
KRT28-201ENST00000306658 FAM216BQ8N7L0 139 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 OR6C3Q9NZP0 311 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 SLC23A1Q9UHI7 598 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 CHD6Q8TD26 2715 aa14.6□□□□□ -0.07
KRT28-201ENST00000306658 C12orf77C9JDV5 145 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 SPINT2O43291 252 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 TUSC2O75896 110 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 PI3P19957 117 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 ZBTB25P24278 435 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 DHODHQ02127 395 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 SRSF1Q07955 248 aaKnown RBP eCLIP14.59□□□□□ -0.07
KRT28-201ENST00000306658 PPP1R1AQ13522 171 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 FCN2Q15485 313 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 OR13A1Q8NGR1 328 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 FXYD6Q9H0Q3 95 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 CLEC4MQ9H2X3 399 aaPredicted RBP14.59□□□□□ -0.07
KRT28-201ENST00000306658 RAI1Q7Z5J4 1906 aaPredicted RBP14.59□□□□□ -0.07
KRT28-201ENST00000306658 LRBAP50851 2863 aa14.59□□□□□ -0.07
KRT28-201ENST00000306658 C9orf170A2RU37 121 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 TNFRSF13BO14836 293 aaPredicted RBP14.58□□□□□ -0.07
KRT28-201ENST00000306658 HBZP02008 142 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 SELLP14151 372 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 VAMP1P23763 118 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 TLE4Q04727 773 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 CD300CQ08708 224 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 CR1LQ2VPA4 569 aa14.58□□□□□ -0.07
KRT28-201ENST00000306658 ABCA11PQ4W5N1 156 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms