RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 UFSP2Q9NUQ7 469 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 TREM2Q9NZC2 230 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 OR1A1Q9P1Q5 309 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 Q9UFV3 132 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 MSRB2Q9Y3D2 182 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 C3orf85A0A1B0GTC6 90 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 H7C1Q1 480 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 TRIM77I1YAP6 450 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 SH2D1BO14796 132 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 PHF1O43189 567 aaPredicted RBP5.52□□□□□ -1.53
USP47-201ENST00000305481 GFRA3O60609 400 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 DIRAS3O95661 229 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 PTBP3O95758 552 aaKnown RBP5.52□□□□□ -1.53
USP47-201ENST00000305481 HAND1O96004 215 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 BMP5P22003 454 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 LMO1P25800 156 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 CCKARP32238 428 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 HLA-DRB3P79483 266 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 FAM74A1Q5RGS3 127 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 TBC1D26Q86UD7 250 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 H1FOOQ8IZA3 346 aaPredicted RBP5.52□□□□□ -1.53
USP47-201ENST00000305481 CNTNAP3BQ96NU0 1288 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 CABLES2Q9BTV7 478 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 CNTNAP3Q9BZ76 1288 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 COQ3Q9NZJ6 369 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 PCDHB10Q9UN67 800 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 ZGRF1Q86YA3 2104 aa5.52□□□□□ -1.53
USP47-201ENST00000305481 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 NDUFS6O75380 124 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 IGLV2-14P01704 120 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 HOXD4P09016 255 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 CTXN2P0C2S0 81 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ZNF250P15622 560 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 S100A10P60903 97 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 RND3P61587 244 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 UBA52P62987 128 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 ACP7Q6ZNF0 438 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 FOXRED2Q8IWF2 684 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 SLC35G3Q8N808 338 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 UBALD1Q8TB05 177 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 SNRNP40Q96DI7 357 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 AQP10Q96PS8 301 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ZNF471Q9BX82 626 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 SLC5A7Q9GZV3 580 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TMEM222Q9H0R3 208 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MBNL3Q9NUK0 354 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 OR14J1Q9UGF5 321 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 SPTBN4Q9H254 2564 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 CHD3Q12873 2000 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 F5H0A9 414 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 HSD17B6O14756 317 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 DEDDO75618 318 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 IFNA21P01568 189 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 FAM87AP0C7U9 286 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MDH2P40926 338 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 TESK1Q15569 626 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 C1orf174Q8IYL3 243 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 CCDC71LQ8N9Z2 235 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 OR2Z1Q8NG97 314 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 OR52M1Q8NGK5 317 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 OR10J5Q8NHC4 309 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 IL1F10Q8WWZ1 152 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 PARP12Q9H0J9 701 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 DUSP13Q9UII6 198 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 METRNQ9UJH8 293 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ZNF835Q9Y2P0 537 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 OR2W1Q9Y3N9 320 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 WIPI2Q9Y4P8 454 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 A6NLC8 198 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 NPIPB11E5RHQ5 1161 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TEX46H3BTG2 121 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 GPR31O00270 319 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 PGLYRP1O75594 196 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 IGHV3-13P01766 116 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 HKR1P10072 659 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MEX3BQ6ZN04 569 aaKnown RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 FAM185AQ8N0U4 392 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 LGI3Q8N145 548 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 PRR18Q8N4B5 295 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ZNF565Q8N9K5 539 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TMEM171Q8WVE6 324 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MUCL1Q96DR8 90 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TMEM56Q96MV1 263 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ASF1BQ9NVP2 202 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TAAR3PQ9P1P4 343 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 ERRFI1Q9UJM3 462 aaPredicted RBP5.51□□□□□ -1.53
USP47-201ENST00000305481 TRAPPC2LQ9UL33 140 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MEMO1Q9Y316 297 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 TMEM56-RWDD3S4R434 201 aa5.51□□□□□ -1.53
USP47-201ENST00000305481 MFSD2BA6NFX1 497 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 ATP6V1G2-DDX39BF2Z307 99 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 PRRG2O14669 202 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 TNFSF12O43508 249 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 CRYAAP02489 173 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 GLRXP35754 106 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 ARHGDIBP52566 201 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 AANATQ16613 207 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms